Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4491 ATGGATGATTCCAAAGTAGCAGAGCTAAAGCAGTTCGTTGATGGATGCAAGTCGAATCCTTCTGTTCTTCACGACCCATCTCTTGCTTTCTTCAAGTCCTATCTTCTCAGCGTGGGTGCTCAGCTTCCACCAGAACCCAAAACGGTGAGCCCCCGGTTTTATGCTAAAAGAGCTGATTTGTctaaagaagatgaagatgacatTGTAGAATCTGACATTGAGTTGGATAATAGTGAGGTTGTGGAACCTGATAATGATCCTCCTCAAAAGATGGGAGATTCTTCAGCTGAGGTAACAGAAGATCAGCGGGATGCTGCACAATTAGCAAAATCTAAGGCTATGGATGCGATGTCAGAAGGTAAGCTGGATGAAGCAGTGGATCAACTAACCGAAGCCATTGTCTTGAATCCCCATTCAGCTATACTCTATGCTACTAGAGCCAGTGTCTTTATCAAGTTGAAGAAACCAAATGCTGCTATTCGCGATGCTGATACTGCCTTGCAGATTAATCCTGACTCAGCTAAAGGTTACAAGATACGAGGACTGGCAAGGGCTATGTTGGGACTTTGGCAGGAAGCAGCAAGTGATCTTCATGTAGCTTCAAAGTTAGATTATGATGAAGAGATTGGAATGGCACTTAAAAAGGTTGAACCAAATGCCCACAAAATTGAGGAGCATAGGAGAAAATATGATCGACTGCGCAAGCAAAGGGAGCATAAGAGAGCCGAACTCAAGAAGAAACAACAAGCTGAAGCTCAAGTAGTGTTTCCATTATTGAACATGGAATCATTGTCTGCTTTAAAAGATGGGCAAGTCATCGGTATTCACTCTGTCAAGGAATTGGACACAAAGTTGAGCGCTGCATCAAAGGCATCTCGTTTGGCGGTCCTGTATTTTACTGCAACATGGTGTGGTCCCTGTCGTTTCATTGCGCCTCATTTTACCAGCTTAGCTGAGAAGCACCCAAAAGTTGTATTTTTGAAGGTTGACATAGATGAGGCAACTGATGCGGCTGCACGCTGGAATATCAGCAGTGTTCCAACCATTTTCTTCATTAAGAATGGCAAAGAAGTTGACAGTGTAGTCGGGGCTGATGTAAATGCACTTGAAAGGAAGATTGCGCAGCATGCCAGCTCTCTTTAA 1143 0.4313 MDDSKVAELKQFVDGCKSNPSVLHDPSLAFFKSYLLSVGAQLPPEPKTVSPRFYAKRADLSKEDEDDIVESDIELDNSEVVEPDNDPPQKMGDSSAEVTEDQRDAAQLAKSKAMDAMSEGKLDEAVDQLTEAIVLNPHSAILYATRASVFIKLKKPNAAIRDADTALQINPDSAKGYKIRGLARAMLGLWQEAASDLHVASKLDYDEEIGMALKKVEPNAHKIEEHRRKYDRLRKQREHKRAELKKKQQAEAQVVFPLLNMESLSALKDGQVIGIHSVKELDTKLSAASKASRLAVLYFTATWCGPCRFIAPHFTSLAEKHPKVVFLKVDIDEATDAAARWNISSVPTIFFIKNGKEVDSVVGADVNALERKIAQHASSL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4491 380 ProSiteProfiles Thioredoxin domain profile. 252 378 IPR013766 -
Sto8g4491 380 MobiDBLite consensus disorder prediction 72 100 - -
Sto8g4491 380 SMART tpr_5 106 139 IPR019734 GO:0005515
Sto8g4491 380 SMART tpr_5 140 173 IPR019734 GO:0005515
Sto8g4491 380 SMART tpr_5 174 207 IPR019734 GO:0005515
Sto8g4491 380 Coils Coil 223 253 - -
Sto8g4491 380 Gene3D Tetratricopeptide repeat domain 67 240 IPR011990 GO:0005515
Sto8g4491 380 ProSitePatterns Thioredoxin family active site. 296 314 IPR017937 -
Sto8g4491 380 Pfam Thioredoxin 289 373 IPR013766 -
Sto8g4491 380 Gene3D Glutaredoxin 259 379 - -
Sto8g4491 380 PANTHER HSC70-INTERACTING PROTEIN 1 378 - -
Sto8g4491 380 SUPERFAMILY TPR-like 100 207 IPR011990 GO:0005515
Sto8g4491 380 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TDX 1 378 - -
Sto8g4491 380 CDD TRX_family 285 374 - -
Sto8g4491 380 Gene3D - 1 44 - -
Sto8g4491 380 CDD Hip_N 3 43 IPR034649 GO:0046983
Sto8g4491 380 Pfam Hsp70-interacting protein N N-terminal domain 2 43 IPR034649 GO:0046983
Sto8g4491 380 SUPERFAMILY Thioredoxin-like 221 377 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4491 Sto-Chr8 47653572 47658459 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4491 K09560 - gmx:100789778 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4491 8 47653572 47658459 Sto8g4491 8 47653572 47658459 ECH