LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g4441	ATGGCTTCAGACGCAGCACCAGCAGAAGAAGACAAAACTTGGGAGGAGGTATTGCGAAGGATGCTCCCAGTTGGTGCTCCATTACCGGACGAAGAGCAGCTCGATTACTCAATTGCAGTTGAATACGTGGGTCCTCCCGTTCCATATGAGGTTCCGAAAGTTGATCCGTTGGACATCGCGTCGGCTTCGTCTCGAGCTCATTCAGTGGCTTCGGTTTCCGACCACACTTCCTCGATTCCGGTCGTCATGCCGATAAATCCGAGGTTCTCCAGGTTCGGTCGCTTCAGAAACGGCACGTTTAATAAGGAGCCGCGTAGTCCGGTGGAGAGTCAAAGGTCGTCTTCGGTTTCGAGAACTCAATTGGATTTGCAGAACGGGGAGGGCGAAGATCACTCGGATTCCGGAGACGGAATTACCGAGGACGCCCTTAGTTCTGTGTCTTCGCCGCGAGCGCCGAATTCAGTTCCCCGAGGCGAGGGTGCGAATGAAGTGAAGCGCCCTACTACTGTGACATTTCATACGCCGAGGGATTCGGAGAACGAAGAGGATGATGGGTTTCCGTCGCCGCGTTCCGTGGCTACGGAGCCAGTGGGATCGCCAGTTGCTGTGCGTAATTCGCAGGCCGGGTCGAGGAAGAGATGGATTTGCTGCAGATGTGGGAAAGGGAATAGATTGAAGGAAAAAGAGGCGTGTTTGGTGTGTGATAAAAGGTATTGCAATAATTGCGTGCTTAAGGCAATGGGGTCAATGCCAGAGGGCCGCAAGTGCGTGAGCTGCATTGGGCAGCCCATAGACGAGTCGAAGAGATCGAGTTTGGGAAAGTGCTCGAGGATGTTGTCGCGAGTGTGTAGCCCGTTGGAGATTAAGCAGATAATGAAGGCGGAAAAGGAGTGCCCAGCCAATCAACTTCGACCTGAGCAGCTTTTTGTTAATGGAAGGCAGTTACGGCAAGACGAATTGGCGGAGATTTTGGGTTGCCCGGTACCTCCTCAGAAGTTAAAACCTGGGAAGTATTGGTATGATAAAGATTCCGGACTTTGGGGAAAGGAGGGAGAGAAGCCTGATAAGATAATAAGCTCAAAACTAAATATTGGAGGCAAGCTTCAGATGAACGCAAGCAACGGAAATACAGGAGTTTACATGAATGGCCGtgaaataacaaaaattgaacTTAGAATGTTGAAGATAGCAAATGTACAATGTCCACGAGATACTCATTTCTGGGTTTATGATGATGGATCTTATGAGGAAGAAggtcaaaataatataaagggGAACATATGGGGAAAGGCATCAACTCGTTTCATATCTTCATTATTCTCATTGCCTGTACCACCAAATAATGCTCAAGGGGTGAATGAGAATCCAACTAACTATTCATCAAGGTCTGTGCCTGAATATTTGGAGCATGGAAGAGTTCAGAAACTTTTGTTGTTTGGCTTGGAAGGATCTGGAACATCCACTCTCTTTAAACAGGCCAAGTTTTTATATGGTAACAAGTTTTCTGCGGAAGAGTTGCAAGACATTAAGCTTATGATTCAAAgcaatatgtacaagtatctcAGCGTTCTCCTTGAAGGACGAGAACAATTTGAAGAAGAGGCTTTGGCAGAAAAAGAATATACTTCTGTAGATGTTGAGCAGTCTGCGCCAGCAGAAACAGCTGCTGATGAAAATAAGCAGTCCATTTACTCAATTAATCCAAGATTCAGGCATTTTTCTGACTGGTTGCTGGATATTATGGCTACTGGAGACTTGGAGGCCTTCTTCCCTGCTGCCACTCGTGAATATGCGCCTATGGTGGACGAGATCTGGAGAGACCCATCTGTACAAGAAACATACAAGAGACGAGAGGAATTGCATAAGCTTCCTGATGTTGCTAAATATTTCTTGGATCGGGCGATAGAAATATCAAGCAATGAGTATGAACCTTCTGATAAGGATGTATTATATGCTGAAGGAGTCACTCAGAGCAATGGTCTCGCCTTTATGGAATTCTCTTTTGATGATAGAAGCCCCATGTCAGAGATTTACAGTGAAAACTTAAATTGCCCTCCTCCCATGACCAAGTATCAACTCATTCGAATACCTTCAAAGGGACTGCGTGATGGTTGCAAATGGCTGGATATGTTTGAAGATGTGAGGGCTGTGATATTCTGTGTTGCCCTGAGTGACTACGACCAAGTGTCCGCTGATAGTTCTGGCCATCTTCGCAACAAAATGACGGCAAGCCGAGATCTTTTTGAGAGTCTGGTTAGATATCCTTGTTTTAAAGATACTCCTTTTGTACTTCTGCTAAATAAGTATGATGCCTTGGAAGAGAAGATAACCAAGGCTCCCTTGTCCACATGTGAGTGGTTCCAGGACTTTAGTCCTGTGAGACCCCATCACAATAATCATGCCCTAGCACACCAAGCATTTTACTATGTGGCAGTAAGATTCAAGGAGCTTTATTCCTCCATAACCGGCCGGAAGTTGTTTGTGTGGCACACTCGAGCTTGGGAGCGTGCCTCAGTCGATGAAGCCTTCAAATTCATAAGGGAGGTCATCAAATGGGATGAAGAGAAGGACGATGAAGTATATGAAATCAACGCAGAAGAATCGTTTTACAGTGAAATGAGTTCTTCGCCGTTTGTTAGACAAGAATGA	2649	0.453	MASDAAPAEEDKTWEEVLRRMLPVGAPLPDEEQLDYSIAVEYVGPPVPYEVPKVDPLDIASASSRAHSVASVSDHTSSIPVVMPINPRFSRFGRFRNGTFNKEPRSPVESQRSSSVSRTQLDLQNGEGEDHSDSGDGITEDALSSVSSPRAPNSVPRGEGANEVKRPTTVTFHTPRDSENEEDDGFPSPRSVATEPVGSPVAVRNSQAGSRKRWICCRCGKGNRLKEKEACLVCDKRYCNNCVLKAMGSMPEGRKCVSCIGQPIDESKRSSLGKCSRMLSRVCSPLEIKQIMKAEKECPANQLRPEQLFVNGRQLRQDELAEILGCPVPPQKLKPGKYWYDKDSGLWGKEGEKPDKIISSKLNIGGKLQMNASNGNTGVYMNGREITKIELRMLKIANVQCPRDTHFWVYDDGSYEEEGQNNIKGNIWGKASTRFISSLFSLPVPPNNAQGVNENPTNYSSRSVPEYLEHGRVQKLLLFGLEGSGTSTLFKQAKFLYGNKFSAEELQDIKLMIQSNMYKYLSVLLEGREQFEEEALAEKEYTSVDVEQSAPAETAADENKQSIYSINPRFRHFSDWLLDIMATGDLEAFFPAATREYAPMVDEIWRDPSVQETYKRREELHKLPDVAKYFLDRAIEISSNEYEPSDKDVLYAEGVTQSNGLAFMEFSFDDRSPMSEIYSENLNCPPPMTKYQLIRIPSKGLRDGCKWLDMFEDVRAVIFCVALSDYDQVSADSSGHLRNKMTASRDLFESLVRYPCFKDTPFVLLLNKYDALEEKITKAPLSTCEWFQDFSPVRPHHNNHALAHQAFYYVAVRFKELYSSITGRKLFVWHTRAWERASVDEAFKFIREVIKWDEEKDDEVYEINAEESFYSEMSSSPFVRQE	882

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g4441	882	PANTHER	EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3-LIKE	22	876	-	-
	Sto8g4441	882	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	472	854	IPR027417	-
	Sto8g4441	882	MobiDBLite	consensus disorder prediction	103	123	-	-
	Sto8g4441	882	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	22	876	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Sto8g4441	882	MobiDBLite	consensus disorder prediction	170	188	-	-
	Sto8g4441	882	SUPERFAMILY	Transducin (alpha subunit), insertion domain	501	652	IPR011025	GO:0007165
	Sto8g4441	882	Gene3D	-	672	860	IPR027417	-
	Sto8g4441	882	CDD	G-alpha	474	853	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Sto8g4441	882	ProSiteProfiles	G-alpha domain profile.	472	861	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Sto8g4441	882	PRINTS	Alpha G protein (transducin) signature	475	490	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Sto8g4441	882	PRINTS	Alpha G protein (transducin) signature	642	664	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Sto8g4441	882	PRINTS	Alpha G protein (transducin) signature	714	742	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Sto8g4441	882	PRINTS	Alpha G protein (transducin) signature	762	771	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Sto8g4441	882	Gene3D	-	503	653	IPR011025	GO:0007165
	Sto8g4441	882	MobiDBLite	consensus disorder prediction	138	152	-	-
	Sto8g4441	882	SMART	galpha_1	458	860	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Sto8g4441	882	MobiDBLite	consensus disorder prediction	96	205	-	-
	Sto8g4441	882	Pfam	G-protein alpha subunit	472	850	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g4441	Sto-Chr8	47148547	47157746	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g4441	-		-	adu:107490595	1372.07

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g4441	8	47148547	47157746	Sto8g4441	8	47148547	47157746	ECH