Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4178 ATGGGAACATCGGTGCAGGTGACGCCACTTTGTGGAGTGTACAATGAGAATCCTCTCTCGTACTTGGTGTCTATTGATGGCTTCAACTTCCTTATCGACTGTGGCTGGAACGACCACTTCGACCCCTCCCTCCTCCAACCACTTTCCagGGTAGCACCAACTATAGATGCAGTCTTACTTTCACATGCGGATACACTTCACCTTGGTGCTGTCCCGTATGCCATGAAGCAGCTTGGACTTTCTGCTCCGATTTATTCAACAGAACCTGTGTACAGACTAGGCCTTCTCACTATGTATGATCAGTATCTTTCAAGAAAGCAAGTATCAGAGTTTGAGCTGTTTACACTAGATGATATTGATTCTGCTTTCCAAAGCATAACCAGGCTAACCTACTCTCAGAATCATCATCTCTCAGGTAAGGGAGAGGGAATAGTGATTGCACCTCATGTTGCTGGACATCTGTTGGGAGGTACTATGTGGAAAATTACGAAAGATGGCGAGGATGTCATTTATGCTGTTGATTTTAATCATCGCAAAGAAAGGCATTTAAATGGAACTGTTCTAAGTTCTTTTGTGCGGCCAGCTGTTCTTATAACTGATGCCTACAATGCTTTGAACAATCAGCCTTATAGACGGCAAAAGGACAAAGAATTTGGAGATATCATGAAGAAGACTCTACGGGCAGGTGGTAATATATTACTTCCTGTTGACACTGCGGGACGAGTGCTTGAACTTATTCTAATGTTGGAATCGTATTGGGCTGACGAAAACTTGAACTACCCCATATATTTTCTTACATATGTTGCAACCAGCACAGTTGATTATGTGAAGAGTTTCCTGGAGTGGATGAGTGATTCCATAGCAAAGTCTTTTGAGCAAACTCGTgaaaatatatttcttttgaaGCATGTCAAGCTTATAATTAACAAGAGTGAACTTGACAATGCTCCAGATGGTCCAAAGGTTGTTCTAGCATCCATGGCGAGTTTGGAAGCAGGTTTTTCTCATGATATATTCATTGAATGGGCAATTGATGTAAAGAATCTTGTGCTTTTTACAGAAAGAGGACAGTTTGCCACTCTAGCTCGTATGCTTCAGGCTGATCCCCCTCCAAAAGCTGTCAAAGTCATTGTCTCCAAGAGGGTTCCGCTGGTTGGGGAAGAGCTAATTGCCTATGAAGAAGAGCAAAATCGAATAAAGAAGGAAGAAGCTTTAAAAGCAAGTCTTATTAAAGAAGAAGAGTTCAAAGCAACTCACGGGGCTGATAGTAATACTAGTGATCCTATGGTCATTGATGCTGGCAAGAGTCATGTTTCTCCAGAAGTTGCTGTTTCACGTGCTGGTGGATACCGGGATGTGTTAATTGATGGGTTTGTACCACCTTCAACAAGTGTTGCTCCGATGTTCCCCTATTATGAAAATACATCAGATTGGGATGATTTTGGCGAAGTCATAAATCCAGATGATTATGTAATCAATGATGAAGATATGGACCATACTTCAGTGCATGGAGGTGATATGGATGGAAAACTAGATGAAGGTGCTGCAAGTTTGCTACTTGATACAAAGCCATCAAAAGTCATATCTGATGAAAGGACTGTACAAGTCAGATGTTCATTGCTTTACATGGACTTTGAGGGTCGTTCAGATGGACGATCAATTAAAAATATTCTCTCCCATGTGGCTCCCCTGAAGCTTGTTTTGGTGCATGGATCAGCTGAGGCCACAGAGCATCTGAAGCAACACTGTCTGAAGTTTGTTTGCCCTCATGTATATGCTCCTCAAATTGAAGAGACAATTGATGTCACCTCTGATTTATGTGCATATAAGGTTCAACTATCTGAGAAGCTGATGAGTAATGTACTCTTCAAAAAGCTAGGAGATTATGAAATAGCATGGGTCGATGCTGAAGTAGGGAAGACAGAAAATGGCATGTTATCTCTGCTCCCCCTTTCAGCTGCAGCTCCTCCACATAAATCTGTTCTTGTTGGTGATTTAAAATTGGCAGATTTCAAGCAGTTCCTCTCCAGCAAGGGTGTTCAGGTAGAATTTTCTGGTGGGGCTTTGCGATGTGGTGAATACGTAACACTGCGCAAGGTTGGGGATGCATCTCAGAAGGCAAGTGCTTCTGAACATTTGTTTGTTTTGCAGATTTTAgggaaattgGGTGGTGGTTCTGGTACTCAGCAAATTGTCATAGAAGGTCCTCTGTGTGAAGACTACTATAAAATTCGTGAATATCTCTACTCACAGTTTTATTTGCTTTGA 2268 0.4153 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSRVAPTIDAVLLSHADTLHLGAVPYAMKQLGLSAPIYSTEPVYRLGLLTMYDQYLSRKQVSEFELFTLDDIDSAFQSITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTMWKITKDGEDVIYAVDFNHRKERHLNGTVLSSFVRPAVLITDAYNALNNQPYRRQKDKEFGDIMKKTLRAGGNILLPVDTAGRVLELILMLESYWADENLNYPIYFLTYVATSTVDYVKSFLEWMSDSIAKSFEQTRENIFLLKHVKLIINKSELDNAPDGPKVVLASMASLEAGFSHDIFIEWAIDVKNLVLFTERGQFATLARMLQADPPPKAVKVIVSKRVPLVGEELIAYEEEQNRIKKEEALKASLIKEEEFKATHGADSNTSDPMVIDAGKSHVSPEVAVSRAGGYRDVLIDGFVPPSTSVAPMFPYYENTSDWDDFGEVINPDDYVINDEDMDHTSVHGGDMDGKLDEGAASLLLDTKPSKVISDERTVQVRCSLLYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKFVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPLSAAAPPHKSVLVGDLKLADFKQFLSSKGVQVEFSGGALRCGEYVTLRKVGDASQKASASEHLFVLQILGKLGGGSGTQQIVIEGPLCEDYYKIREYLYSQFYLL 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4178 755 SMART Beta_Casp_2 242 365 IPR022712 -
Sto8g4178 755 Pfam Metallo-beta-lactamase superfamily domain 22 196 IPR001279 -
Sto8g4178 755 Pfam Cleavage and polyadenylation factor 2 C-terminal 645 752 IPR025069 -
Sto8g4178 755 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 1 754 IPR027075 GO:0005847|GO:0006378|GO:0006379
Sto8g4178 755 SUPERFAMILY Metallo-hydrolase/oxidoreductase 5 602 IPR036866 -
Sto8g4178 755 Pfam Beta-Casp domain 242 365 IPR022712 -
Sto8g4178 755 Coils Coil 392 412 - -
Sto8g4178 755 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 533 583 IPR011108 -
Sto8g4178 755 CDD CPSF2-like_MBL-fold 8 203 IPR035639 -
Sto8g4178 755 Gene3D - 7 259 IPR036866 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4178 K14402 - gmx:100796817 1344.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4178 8 44524708 44567441 Sto8g4178 8 44524708 44567441 ECH