LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g3129	ATGGGAAGCTACAGAAGAGGAAAGGTTGCTTTGGATGCTTTTCGCGGTTTTTGTTCAAAGATTACCTCGACAACCCAAGTTTCGCAATCCAGTTCAAGAGTTTGCCGATCTGAATATTATTTCACTTCGGTATCGAAAGGAGCTAATCGTTATGGGTTTACATCATATTCTTTTATATCTCAGAGATTAGGCTTTCAAGGTAGAGTCAATAGGAGTTTATCCAGCCCGTTTCTTGCTGGGGCTAGGAGGTTTTACTATGTGGATAGGTCCAATGTAAAACACTTTAAGCCGCGAGGGCCTGGTCGGTGGTTTCAGAATCCTAGAAATGTATTCATTGTAGTGATGGTTGGTTCAGGGGTTTTGATCACTGTGTACTTTGGGAATTTGGAAACTGTTCCCTATACCAAGCGATCTCATTTGATTCTTATGTCCAAATCTGTGGAGAGGAAGCTTGGAGAGACCGAGTTTGAGCGAATGAAAGCGTCTTTTAAGGGGAAAATGTTGCCTGCTATACACCCTGAAAGCATACGGGTAAGATTGATAGCTAGGGATATAGTTGATGCATTGCAGAAAGGGTTGAGGAAAGAGCAGGTATGGAGTGATTTGGGGTACACATCAGAGCATGCCCAGGCACACGAAGGGAGTGTTCATGAGACATTGAATGCATTGTCCGAGAAGGAGAGCAGAAAAAAGGGTGAGAAACTAGGGTCACAGCCTAGTACATCACATTTGGAAGGATTGAAATGGGAAGTGCTAGTGGTGAATGAGCCTGTTGTCAATGCCTTTTGCTTACCGGGTGGGAAGATCGTTGTGTTTACTGGTTTGCTCGAGCATTTTAAAAGTGATGCAGAACTAGCAACTGTTATAGGACATGAGgtTGGGCACGCAGTGGCTCGACACAGTGCTGAAGGGATCACAAAGAACCTGTGGTTTGCAATTCTACAGTTGATACTTTATCAGTTTGTCATGCCTGATGTTGTCAACACAATGTCGGCTCTTTTCTTAAGGTTGCCTTTCTCTAGGAGaatggaaatggaagcaGATTATATCGGGTTGCTGTTAATGGCTTCAGCTGGATATGATCCACGGGTTGCTCCCACAGTCTATGAGAAGCTGGGAAAGGTCACTGGTGAGTCGTCTCTTAGAGATTACCTTTCTACTCATCCATCTGGAAAAAAGAGGGCACAATTGCTGGCTCAAGCTCAGGTCATGGAGGAAGCACTTACTATTTACAAGAATGTAAGAGCAGGAcatggggttgagggttttctTTAG	1275	0.4275	MGSYRRGKVALDAFRGFCSKITSTTQVSQSSSRVCRSEYYFTSVSKGANRYGFTSYSFISQRLGFQGRVNRSLSSPFLAGARRFYYVDRSNVKHFKPRGPGRWFQNPRNVFIVVMVGSGVLITVYFGNLETVPYTKRSHLILMSKSVERKLGETEFERMKASFKGKMLPAIHPESIRVRLIARDIVDALQKGLRKEQVWSDLGYTSEHAQAHEGSVHETLNALSEKESRKKGEKLGSQPSTSHLEGLKWEVLVVNEPVVNAFCLPGGKIVVFTGLLEHFKSDAELATVIGHEVGHAVARHSAEGITKNLWFAILQLILYQFVMPDVVNTMSALFLRLPFSRRMEMEADYIGLLLMASAGYDPRVAPTVYEKLGKVTGESSLRDYLSTHPSGKKRAQLLAQAQVMEEALTIYKNVRAGHGVEGFL	424

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g3129	424	CDD	M48C_Oma1_like	246	407	-	-
	Sto8g3129	424	Pfam	Peptidase family M48	243	399	IPR001915	GO:0004222\|GO:0006508
	Sto8g3129	424	PANTHER	METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL	82	416	-	-
	Sto8g3129	424	Gene3D	Metalloproteases ("zincins"), catalytic domain	224	304	-	-
	Sto8g3129	424	PANTHER	METALLOENDOPEPTIDASE OMA1	82	416	-	-
	Sto8g3129	424	MobiDBLite	consensus disorder prediction	210	241	-	-
	Sto8g3129	424	MobiDBLite	consensus disorder prediction	211	236	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g3129	K23010		-	gmx:100799127	603.979

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g3129	8	24962977	24965314	Sto8g3129	8	24962977	24965314	ECH