Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2989 CTGACCCGATCCCTGCTTCCCGAAGTTGCAGAAACCGAGGACGGAAACCGAAGAAGCTCTTCGGGAGCTACAGCCATGAGGCTCATAGTGCCACTCCAAGGCGTAGTCCAAGGCAGAGGAGGCCTTCTTCTCGGCTCTCTCATTCCCTGTGCGCTCTTCTACTTCCTCCAACTCTATCTCAAACGGGACCGTTCCAAAAACTCCTCGAATCCTCCGTCTCCTTCTGCGTCGTCCTCGAATCTCATGGAACTTTCACGCTCGTCGTCGCGCTCTAATTTGACCACCCGTGGATCCATTGGCCGGGTTCGGGTATCGTCCCTCGCGAGTGATAttgcgaaacctgatgaatcgCCGTATTACATTGGGCTGGATAGAGCCTCAAAGGATCCGTATGATAGGTTGAACAACCCGGACGGAATAGTTCAGCTCGGATTGTCCGATAATACGCTTTGCTTGGATTTAATTGAGAAGTGGATGTCAGTGAACTTGAAGGAATCACTTCTGGGAACCGATGATGTCACTTTGAGTATGAATGGGATTGCAGCGTATCAGCCATTTGATGGATTGGAGGAATTGAAAGTGGCCATGTCAAATTTGATGTCTCAGGCAATGGGAGGGTCCACGAAATTTGACCCATCTAATATTGTATTAACATGTGGTGCTACTCCTGCTATTGAGATACTAACCTTCTGTTTGGCTGACCATGGAAATGCGCTCCTTGTCCCCACACCTTATTATCCGGGTTTTGACAGGGATGTGAAATTTCGAACGGGAGTAGACATAATTCCTGTTCATTGTCGTAGTACAGACAATTTCACTTTAAGTATCATTGCTCTTGAACAAGCTTATAGTCAAGCAAGAAAACGAGGAGTTAAAGTTCGTGGAATTCTCCTTTGCAACCCTTCAAATCCTGTTGGCAACTTGCTGTCACAGGACACGCTTTATGGTCTTCTAGACTTTGCCCAGGAAAAAAATATTCACATAATTTCTGATGAACTATATGCAGGCTCCACATATGGAAGTGAGAAGTTTGTGAGTTTAGCTGAAATTCTTGATTCAGAATATATAGACAAGAGCCGGGTTCATATAATATATGGCCTGTCAAAAGACCTTGCTCTTCCTGCCTTTAGAGTTGGGGCTATATATTCATTTAACGAAAGTGTTTTAGCTGCTGCTAAGAAGTTAACTAGATTTTGCTCTGTATCTGCTCCGACCCAGCGGCTAGTAACTTCAATGCTTTCAGATGAAAGATTTATTCAAGAGTACTTAGGTACCAACCTGAAGAGAATTAGGGAACTTCATGAAGAATTTGAGGCTGGTTTAAATAAACTGGGAATAAAGTGTGCTAAGAGCAGTGCTGGTTTGTACTGCTGGGCTGATATGAGTGGATTAATCCGACCTTACAGTGAAAGAGGTGAACTTGACTTATGGAAGAAGTTTCTAAGCATTTCCAAGATCAATATAACTCCTGGATCAGCTTGTCATTGTATAGAACCAGGATGGTTTCGTATTTGTTTTACTACTTTAACATTGGAGGACATTCCTTTAATTATTGAACGGTTTAGGAGAGTTGTTGAGACTTGTGAATCTTCTGGTTGA 1599 0.4309 LTRSLLPEVAETEDGNRRSSSGATAMRLIVPLQGVVQGRGGLLLGSLIPCALFYFLQLYLKRDRSKNSSNPPSPSASSSNLMELSRSSSRSNLTTRGSIGRVRVSSLASDIAKPDESPYYIGLDRASKDPYDRLNNPDGIVQLGLSDNTLCLDLIEKWMSVNLKESLLGTDDVTLSMNGIAAYQPFDGLEELKVAMSNLMSQAMGGSTKFDPSNIVLTCGATPAIEILTFCLADHGNALLVPTPYYPGFDRDVKFRTGVDIIPVHCRSTDNFTLSIIALEQAYSQARKRGVKVRGILLCNPSNPVGNLLSQDTLYGLLDFAQEKNIHIISDELYAGSTYGSEKFVSLAEILDSEYIDKSRVHIIYGLSKDLALPAFRVGAIYSFNESVLAAAKKLTRFCSVSAPTQRLVTSMLSDERFIQEYLGTNLKRIRELHEEFEAGLNKLGIKCAKSSAGLYCWADMSGLIRPYSERGELDLWKKFLSISKINITPGSACHCIEPGWFRICFTTLTLEDIPLIIERFRRVVETCESSG 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2989 532 Gene3D - 163 415 IPR015421 GO:0003824
Sto8g2989 532 MobiDBLite consensus disorder prediction 64 95 - -
Sto8g2989 532 Gene3D Aspartate Aminotransferase, domain 1 129 517 IPR015422 GO:0003824
Sto8g2989 532 Pfam Aminotransferase class I and II 142 520 IPR004839 GO:0009058|GO:0030170
Sto8g2989 532 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 143 169 - -
Sto8g2989 532 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 290 314 - -
Sto8g2989 532 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 326 349 - -
Sto8g2989 532 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 392 415 - -
Sto8g2989 532 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 177 193 - -
Sto8g2989 532 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 214 234 - -
Sto8g2989 532 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 236 257 - -
Sto8g2989 532 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 360 384 - -
Sto8g2989 532 SUPERFAMILY PLP-dependent transferases 123 526 IPR015424 -
Sto8g2989 532 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 15 528 - -
Sto8g2989 532 MobiDBLite consensus disorder prediction 1 22 - -
Sto8g2989 532 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 366 379 IPR004838 GO:0003824|GO:0009058|GO:0030170
Sto8g2989 532 PANTHER AMINOTRANSFERASE ACS12-RELATED 15 528 - -
Sto8g2989 532 CDD AAT_like 183 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2989 Sto-Chr8 22229728 22232063 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2989 K14270 - gmx:100800539 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2989 8 22229728 22232063 Sto8g2989 8 22229728 22232063 ECH