Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2970 ATGTGGAAGGAGCTTTCTTCGGCGTCTATCTCTGTAGGGAACTCGTTGATATCGGATTATGTTATTTGTCGATGGAAGAGTCCCCCTCCTATGTTCTTCAAGCTTAACTTCAATGTGAGCTTAAGAGAGGGCGTTTCTGCAGGTGTTGGGTGCGTCATCCGTAATGAAAAAGGTCGCATTCTCGCGACTATGGCTAAGCGTCTTCCAGAGGCTGCATCAATTGAGGAGCTCGAAGTCGAAGCCTTGTGTTTGGGTTCGAAAATGGCAAGGGATCTGAGTATTAGGAAGATTGAGATTGAGGGTGATTTAAATAAGTACTCCAAAATGTCTAAAGTACAAAATGATCCCCTTCTGCAAGTTGAAACAACATGTGGATCACTTTTGTATGAGCTTCAGATAATATGGGATGAAGTTGGGGAATCTGAGACTGAAAGAGATAAAATGTTGCTTGAGCTCGAACGAGAGTGTCTAGAGGTGTATAGAAGAAAGGTAGACCAGGCAAATCGAAGTAGAGCTCAATTAAGGCAGGCAATTGCTGATTCTGAAGCAGAGCTTGCAGCTATCTGTTCCGCAATGGGAGAGCGGCCAGTACATATTAGGCAGTCTGATCAAAAGGCTGCAAGCTTGAAAGAAGAGCTTGAAAGAATTCTTCCTGAGCTCGACGAGATGCGGAAAAGGAAGTCTGAAAGGAGAGTTCATTTTATAGAAGTCCAAGAGCAGATACTAATTATCTCAAATGAGATACATGGGTCCCAAGATCATATTCCTGCCAAAACAGTTGCAGATGAATCTGATTTATCCTTGAGAAAGCTTGAAGAATTGCACAGAGAGCTGCAGACACTAAAAAAAGAGAAGAGTGATCGCCTCCAAAAGATCCAGGACCACCTGTATGCGTTAAACTCTCTTTGTTTGGTGCTTGGCTTGGACTTTAAGCAGATAATTAGTGAAATTCATCCTAGTTTAGGAGATAATGAAGGACCTAAGAGTGTAACTAATGATACAATCCAGCAATTGGCAGTTGCTATACAAAATCTGCGGGAAGTTAAGTTGCAGAGAATGCAGAGGCTCCAAGATCTCGCAACAACAATGTTGGAGCTTTGGAACTTGATGGATACACCAATCGAGGAGCAACAGATGTTTCAAAATGTTACTTGTAATGTAGCTGCTTCAGAACATGAAATAACTGAGCCTAACACCTTGTCAGTGGATTTCATCAATTATGTTGAGGCTGAAGTATCCAGGTTAGAAGAGTTAAAAGCAAGCAAAATGAAAGAGCTTGTATTTAAGAAGAGAGCAGAACTAGAGGAGATCTGTCGAAAGATGCATTTGGTTCCAGATATAGATACTGCAGTGGAATATGCTGTTGAAGCTATAGAGTCTGGATCTGTTGACCCCGCTTGTGTGCTTGAACAAATTGAGCTTCAAATTTCCAAGGTCAAGGAAGAAGCTTTTAGTAGAAAAGAAATACTTGAAAAAGTTGAGAAATGGTTGACTGCATGTGATGAGGAGTCTTGGCTTGAGGAGTACAACAGGGATGAAAATCGGTACAATGCAGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTTAATAAACTTCCAGCAATGGTAGATGCTTTGGCTTCAAAGACTGTTGCGTGGGAAAAGGATAAAGGCGTTGAGTTCACATATGATGGTATACGTCTGCTTTCAATGCTTGAGGAATACACCATATTAAGGGAAGAGAAAGAGCAAGAACGTCGTAGGCAAAGGGACCTGAAGAAACTTCAGGGACAACTGATAGCGGAACAGGAGGCACTTTATGGGTCAAAACCAAGCCCTTCAAAGACTCAGACTGCAAAAAAGGCACCTAGAATGTCAACTGGAGGTGCCTCTAGCAGAAGAGTTTCCCTTGGAGGAGCAATGGTTCAAACTCCTAAAACTGCTCACTCACGCCCACAAAGAAAGACTGACCATGGGCACCATATTGACAATCACCTGGATGATTCTGTTTCTTCTTTATCATCAGTGCGAAGAGGGCTGGACATTGCCGGTGTCCCTGCAAAAAAGCAATCATTTGGTGGTGCTGGAGGTGTTCGTGACATACAATCATCTCCTATGATGCGCCAACCTTTCTCTCCCATTTCTTCAACCTTATCATCAAAAGCTAACATGAAAAACCCAACAACAGACGAACTCAACACCACCACCACACACAGTGACAAGTTTCAGAAAACCATTGCACCTACCACCACTCTGCCATTCACTCCCTCCAAGACAGCACCGCCACCACCTGTTATGGCAGATGAAGAGAACAGAACTCCAAAGTCAATAATGCCTAATCCTTCTCTCCCAACCACGCCTTCCACAGTTTCAGCTCCCATGAACATGGCCATCACTCcagctcatcatcatcatcatcatcctcctCCCCCATTGTTTCCTATTGCAGGAGGTGACTCTGTTAAAGAGATCGAGTATTCTTTTGAGGAAAGAAGGCTGGGTTTTGTTGTTTTAgcttga 2520 0.4274 MWKELSSASISVGNSLISDYVICRWKSPPPMFFKLNFNVSLREGVSAGVGCVIRNEKGRILATMAKRLPEAASIEELEVEALCLGSKMARDLSIRKIEIEGDLNKYSKMSKVQNDPLLQVETTCGSLLYELQIIWDEVGESETERDKMLLELERECLEVYRRKVDQANRSRAQLRQAIADSEAELAAICSAMGERPVHIRQSDQKAASLKEELERILPELDEMRKRKSERRVHFIEVQEQILIISNEIHGSQDHIPAKTVADESDLSLRKLEELHRELQTLKKEKSDRLQKIQDHLYALNSLCLVLGLDFKQIISEIHPSLGDNEGPKSVTNDTIQQLAVAIQNLREVKLQRMQRLQDLATTMLELWNLMDTPIEEQQMFQNVTCNVAASEHEITEPNTLSVDFINYVEAEVSRLEELKASKMKELVFKKRAELEEICRKMHLVPDIDTAVEYAVEAIESGSVDPACVLEQIELQISKVKEEAFSRKEILEKVEKWLTACDEESWLEEYNRDENRYNAGRGAHLTLKRAEKARALVNKLPAMVDALASKTVAWEKDKGVEFTYDGIRLLSMLEEYTILREEKEQERRRQRDLKKLQGQLIAEQEALYGSKPSPSKTQTAKKAPRMSTGGASSRRVSLGGAMVQTPKTAHSRPQRKTDHGHHIDNHLDDSVSSLSSVRRGLDIAGVPAKKQSFGGAGGVRDIQSSPMMRQPFSPISSTLSSKANMKNPTTDELNTTTTHSDKFQKTIAPTTTLPFTPSKTAPPPPVMADEENRTPKSIMPNPSLPTTPSTVSAPMNMAITPAHHHHHHPPPPLFPIAGGDSVKEIEYSFEERRLGFVVLA 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2970 839 Coils Coil 568 598 - -
Sto8g2970 839 Coils Coil 157 184 - -
Sto8g2970 839 Coils Coil 210 230 - -
Sto8g2970 839 Pfam Reverse transcriptase-like 46 105 IPR002156 GO:0003676|GO:0004523
Sto8g2970 839 Gene3D - 36 143 IPR036397 GO:0003676
Sto8g2970 839 MobiDBLite consensus disorder prediction 609 633 - -
Sto8g2970 839 MobiDBLite consensus disorder prediction 604 667 - -
Sto8g2970 839 MobiDBLite consensus disorder prediction 650 667 - -
Sto8g2970 839 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 115 737 IPR007145 GO:0000226|GO:0008017
Sto8g2970 839 Gene3D - 476 609 - -
Sto8g2970 839 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 115 737 - -
Sto8g2970 839 CDD RNase_H_like 35 102 IPR044730 -
Sto8g2970 839 Coils Coil 264 291 - -
Sto8g2970 839 Pfam Microtubule associated protein (MAP65/ASE1 family) 126 618 - -
Sto8g2970 839 MobiDBLite consensus disorder prediction 715 786 - -
Sto8g2970 839 MobiDBLite consensus disorder prediction 715 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2970 Sto-Chr8 22005195 22013961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2970 119 628 EF-hand Containing Proteins AT5G62250 60.232 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2970 K16732 - qsu:112026391 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2592 10 36219006 36223947 Sto8g2970 8 22005195 22013961 CCT
Sto10g2592 10 36219006 36223947 Sto8g2970 8 22005195 22013961 ECH
Sto8g2970 8 22005195 22013961 Sto8g2970 8 22005195 22013961 ECH