Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2860 ATGCCAAGATATCCATGGTCAGATGGTCCTGAATATATCACCCAATGCCCAATCCAACCTGGACACAAGTTTAGCCAAAAGGTCATTATTTCTGAAGAAGAAGGCACTCTTTGGTGGCATGCCCATAGTGACTATTCCAGAGCCACTGTTCATGGAGAATGGTGGAAGCAAGACATTGTGCAAGTATTCAATGACTTCCGTACAAATGGAGGAGACCCTGTGCCGTCTGATGCTTACACAATCAATGGCCAACCTGGTGATCTTTATCCATGTTCTAATACAGAAACTACCAAGTTTAAGGTGAAACATGGGAAGACCTACCTCCTCCGGATCATCAACGCAGCACTGGAAGACATTCTATTCTTCGGCATTGCAAATCACAAACTAACAATAGTAGGATCGGACGGAAGCTACCTAAAGCCAATACAAGTAGATTACATCACAATCTCACCTGGCCAGACCATGACCGTCCTACTCAAAGCAAACCAACCATTAGGGCAATACTACATGGCAGCCAAAGCCTACACAAGTGTGGACCCCAACTTCGTCCAATTCAACCCCACAACCACCACAGCCATCCTCCAATACGAAGGAAACCACATCCCCATCACTTCTTCCACTCCTTCCCTCCCTTCCCTCCCTTCCTTCAACGACACCAACGCCTCCACCAACCTCATTCGCCAATTCAAGAGCCTCTCAAACGACGACCACCCCATCGACCTTCCCTTGAACATAACCACAAGCCTCTTCTACACAACTTCCATCAACACATTACCATGTGGAAATGGGTCCACGTGTGTTGGACCCAACCAGAATCGGCTCTCGACTAGCATAAACAATGTAAGCTTCCGGATGCCTCCTAGGAGTAACATCTTGGAGGCTtattataataatgataattataatgAGAGTGTGTATGGTGAGAAGTTTCCGGATGTGCCTCCGTTGAGGTTTAACTTCACGGGGAATGATTTGCCTTCGTTCTTGTTGACTCCTTCGGTGGGTACGGAAGTGAAGGTGCTTGAGTATGGATCCACGGTGGAGATGGTTCTTCAAGGGACCAACTTGCTGGGTGGTGCTGAACATCCCATTCATCTTCATGGACATAGTTTCTATGTGGTGGGATGGGGATTTGGGAACTTCGATGAAGACAAGGATCCTTTGAATTATAATCTTGTGGATCCTCCTTATCAGAATACAGTTGTGGTGCCCAAAAATGGTGTATGGTTCATGCATTGCCATTTTGAGCGTCACGTGACTTGGGGCATGGCTATGACTTTTATTGTGAAGAACGGTAACAATGCAGATGAGAAGATGCTGCCTCCACCACCGGACATGCCCAAATGTTGA 1350 0.463 MPRYPWSDGPEYITQCPIQPGHKFSQKVIISEEEGTLWWHAHSDYSRATVHGEWWKQDIVQVFNDFRTNGGDPVPSDAYTINGQPGDLYPCSNTETTKFKVKHGKTYLLRIINAALEDILFFGIANHKLTIVGSDGSYLKPIQVDYITISPGQTMTVLLKANQPLGQYYMAAKAYTSVDPNFVQFNPTTTTAILQYEGNHIPITSSTPSLPSLPSFNDTNASTNLIRQFKSLSNDDHPIDLPLNITTSLFYTTSINTLPCGNGSTCVGPNQNRLSTSINNVSFRMPPRSNILEAYYNNDNYNESVYGEKFPDVPPLRFNFTGNDLPSFLLTPSVGTEVKVLEYGSTVEMVLQGTNLLGGAEHPIHLHGHSFYVVGWGFGNFDEDKDPLNYNLVDPPYQNTVVVPKNGVWFMHCHFERHVTWGMAMTFIVKNGNNADEKMLPPPPDMPKC 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2860 449 Gene3D - 265 449 IPR008972 -
Sto8g2860 449 ProSitePatterns Multicopper oxidases signature 1. 407 427 IPR033138 -
Sto8g2860 449 ProSitePatterns Multicopper oxidases signature 2. 412 423 IPR002355 GO:0005507
Sto8g2860 449 SUPERFAMILY Cupredoxins 4 49 IPR008972 -
Sto8g2860 449 Pfam Multicopper oxidase 331 432 IPR011706 GO:0005507|GO:0016491
Sto8g2860 449 Gene3D - 49 234 IPR008972 -
Sto8g2860 449 PANTHER LACCASE 1 52 - -
Sto8g2860 449 PANTHER LACCASE 50 449 - -
Sto8g2860 449 Gene3D - 1 48 IPR008972 -
Sto8g2860 449 Pfam Multicopper oxidase 51 199 IPR001117 -
Sto8g2860 449 CDD CuRO_2_LCC_plant 52 196 IPR034285 -
Sto8g2860 449 PANTHER MULTI-COPPER OXIDASE 50 449 IPR045087 -
Sto8g2860 449 PANTHER MULTI-COPPER OXIDASE 1 52 IPR045087 -
Sto8g2860 449 SUPERFAMILY Cupredoxins 268 449 IPR008972 -
Sto8g2860 449 SUPERFAMILY Cupredoxins 52 229 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2860 Sto-Chr8 20871296 20873344 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2860 K05909 - qsu:112034097 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2860 8 20871296 20873344 Sto8g2860 8 20871296 20873344 ECH