Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2856 ATGTCGATGCTCGATTCCTTCTTCAACAAGGGTTTTAAAGGTTCCAAATGTAAAACTCTCCTCAAACTGACGATTCCACGTATAAAGTTGCTAAGAAACAGAAGAGAGATCCAGTTAAAGCAGATGCGCCGTGACATTGCTAAGCTACTTGAGACTGGTCAAGAAGCTACTGCTCGCATTAGGGTCGAGCATATTATACGAGAGGAAAATATGATGGCTGCTCAAGAGATCCTTGAACTATTTTGTGAGCTTATTGCTGTCCGTCTTCCAATAATTGAATCACAAAGGGAGTGTCCTCTAGATTTGAAGGAAGCAATATCTAGTGTATGCTTTGCTGCACCAAGATGTGCCGATCTGCCTGAGTTGTTGCAGGTTCAACTGTCATTTGCTTCAAAATATGGGAAGGAATTTGTGTCAGCAGCAACTGAGCTCAGGCCAGATTGTGGTGTTAATCGCCAGTTAATAGAGCTGCTATCGGTTCGTGCTCCTTCACCGGAAAAGAAACTGAAGCTTCTAAAAGAAATTGCTGTGGAGCATGACTTAGATTGGGATCCAGCTACTTCAGAAACTGAATTCTTTAAAAAACATGAAGACTTACTGAATGGCCCAACAGAATTTGGAAGTGGATCTAAATTACCCCTTCCTGAAGAAAAACGTGATGAAGCATTGTATTCTGATCCATATCAACCCAATAAAGAAGAACCCGATTCTGATTCTGGCTCTGACACATTAGAATTTCCTGAAGTTCCTAAAGTCCCAGTGCCGTCAAGTGCAAATGTAGCCACAGCTCCAGAAACGGTCACATCTGCTCAATCTGTTCCACCCCCTGAAGTTAATCTTCACTCTTCAAGCAGTTCTGGCGTTACTGCAGACATAAATCAAGAGCAGGTAGAAGAAAAGTCAATGGCTGTTAATGATGAACCCCAATATTCATTTGGTAGGGAAAATAAACAGTTTGTGCCATTCATCGCCCCACCATTGGTATCATCTGGATCATTTTCTTCAAGACGAAGCGACTCACCTCCCTCCCTTCCAAAGACAAAAACTGAGGCCGATGTCGACTTGCAGGATGTGTTGGTAGCTGCTCATGCTGCTGCTGAAACTGCTGAACGTGCAGCTGCTGCCGCTCGCTCAGCAGCTACTCTTGCACAAATTCGAATTAATGAGCTTACCAAGAAAAGTAGTGAACATATACAGGACAGTAGCTCTGAGAACCCATTCTATACAGATAGTATTAATCAGTCTGCAACAGCCGAAACAGGGCGATTTACTGAGCACAATACTGCAGGTGAGTACAGTGACAGTGAAACAAACCATTTTGAATCTCACCAGCGTCACAACACTGCTCCGGAACCGGAATCTAGTTTTCCTCCATTTGACACACTCAAGGCAGATTTTGATTCTTCTCTACCTGGTAATCATGTACCAGAAGACAGGCCCTCTGGCCACCAACCTCAGAGATTACCCTCAATGGATGATGACCCATATTATTCCTACCCCAACTTGTTTACCTCGCAAAATTCAAATGCTGGATCTGGTGCTCATTCTTCTGATAATACCCACTCTACTCATCATCTGTGA 1581 0.4345 MSMLDSFFNKGFKGSKCKTLLKLTIPRIKLLRNRREIQLKQMRRDIAKLLETGQEATARIRVEHIIREENMMAAQEILELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQLSFASKYGKEFVSAATELRPDCGVNRQLIELLSVRAPSPEKKLKLLKEIAVEHDLDWDPATSETEFFKKHEDLLNGPTEFGSGSKLPLPEEKRDEALYSDPYQPNKEEPDSDSGSDTLEFPEVPKVPVPSSANVATAPETVTSAQSVPPPEVNLHSSSSSGVTADINQEQVEEKSMAVNDEPQYSFGRENKQFVPFIAPPLVSSGSFSSRRSDSPPSLPKTKTEADVDLQDVLVAAHAAAETAERAAAAARSAATLAQIRINELTKKSSEHIQDSSSENPFYTDSINQSATAETGRFTEHNTAGEYSDSETNHFESHQRHNTAPEPESSFPPFDTLKADFDSSLPGNHVPEDRPSGHQPQRLPSMDDDPYYSYPNLFTSQNSNAGSGAHSSDNTHSTHHL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2856 526 MobiDBLite consensus disorder prediction 329 350 - -
Sto8g2856 526 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 1 512 - -
Sto8g2856 526 MobiDBLite consensus disorder prediction 329 345 - -
Sto8g2856 526 MobiDBLite consensus disorder prediction 391 410 - -
Sto8g2856 526 Coils Coil 32 59 - -
Sto8g2856 526 MobiDBLite consensus disorder prediction 221 239 - -
Sto8g2856 526 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Sto8g2856 526 PANTHER IST1 FAMILY MEMBER 1 512 IPR005061 GO:0015031
Sto8g2856 526 MobiDBLite consensus disorder prediction 499 519 - -
Sto8g2856 526 MobiDBLite consensus disorder prediction 427 526 - -
Sto8g2856 526 Gene3D - 5 192 IPR042277 -
Sto8g2856 526 MobiDBLite consensus disorder prediction 259 289 - -
Sto8g2856 526 MobiDBLite consensus disorder prediction 221 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2856 Sto-Chr8 20792879 20796834 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2856 - - gmx:100805899 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2856 8 20792879 20796834 Sto8g2856 8 20792879 20796834 ECH