Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2609 ATGACAAGTGTGACATTGCGCATTCATTTCTCCGTCTCCGCATTAGCAATGTTCCTTCTCAAGGCATGGAGATCAGCGGCTTTTGCTGTTTATGGATACCAGAATTTCACCAAAGCTGGTTTTCTCGAGCATTCGAAGAGGTTCAAACCTGAGgaaatagaaacaaaaattCCGGAAAAGAATTGCATTGTTACTGGAGCTAATTCCGGAATTGGTTATGCATCAGCTGAGGGTCTTGCACAGCGTGGTGCAACTGTCTATCTTGTATGTCGGAATAAGGAGAAGGGAGAAGCTGCTCTTTCTAAAATTCAATCCAAAACAGGCAATCAGAACGTACATTTGGAGGTTTGTGACCTTTCTTCTATCAGTGAGATCAAATCCTTTGCATCCAGATTTTCTGAAAAGAATGTTCCAGTTCATGTGTTGATTAACAATGCTGGCTTGCTTGAGAATAATCGAGTTACCACATCAGAAGGGTTTGAGCTGAACTTTGCTGTAAATGTACTAGGCACATATGCCTTGACAGAATCAATGTTGCCATTACTGGAGAAAGCTGCCCCTGATGCTCGTGTCATTACGGTTGCCTCTGGTGGAATGTATACTGCTTCCTTGACTAAAGATCTAATGTATTCCGAGCAGAACTTTAATGGAGTTGAACAATATGCTCGAAACAAGCGTGTTCAGGTTGCATTAACAGAAAAGTGGGCTGACAAATACAAGAACAAGGGGATAGGATTTTACTCAATGCACCCAGGTTGGGCTGAGACTCCTGGGGTTGCCAAGAGTTTGCCAAGCTTCAATGAAAAGTTTCAGGGGAAGCTTAGAACAAGTGAAGAAGGTGCAGACACTATAATTTGGTTATCCTTACAACCAAAAGAGAAATTAGCATCAGGTGCACTTTATTTTGATAGAGCTGAAGCTCCAAAGCACCTTACATTTGCAGCTACCAGTGGATCTCATGCTTTGATAGACTCTATTGTTGATGATCTGAACTCCATGGCTTCTCTTTCAGCCTAA 1017 0.4169 MTSVTLRIHFSVSALAMFLLKAWRSAAFAVYGYQNFTKAGFLEHSKRFKPEEIETKIPEKNCIVTGANSGIGYASAEGLAQRGATVYLVCRNKEKGEAALSKIQSKTGNQNVHLEVCDLSSISEIKSFASRFSEKNVPVHVLINNAGLLENNRVTTSEGFELNFAVNVLGTYALTESMLPLLEKAAPDARVITVASGGMYTASLTKDLMYSEQNFNGVEQYARNKRVQVALTEKWADKYKNKGIGFYSMHPGWAETPGVAKSLPSFNEKFQGKLRTSEEGADTIIWLSLQPKEKLASGALYFDRAEAPKHLTFAATSGSHALIDSIVDDLNSMASLSA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2609 338 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 23 328 - -
Sto8g2609 338 Pfam short chain dehydrogenase 60 261 IPR002347 -
Sto8g2609 338 PANTHER RETINOL DEHYDROGENASE 23 328 - -
Sto8g2609 338 Gene3D - 48 330 - -
Sto8g2609 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 303 IPR036291 -
Sto8g2609 338 PRINTS Glucose/ribitol dehydrogenase family signature 61 78 IPR002347 -
Sto8g2609 338 PRINTS Glucose/ribitol dehydrogenase family signature 137 148 IPR002347 -
Sto8g2609 338 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
Sto8g2609 338 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Sto8g2609 338 PRINTS Glucose/ribitol dehydrogenase family signature 270 290 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2609 Sto-Chr8 18307401 18311071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2609 49 183 Acyl Lipid Metabolism Gene Families AT3G06060 28.467 4.09e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2609 K11168 - gmx:100775215 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2609 8 18307401 18311071 Sto8g2609 8 18307401 18311071 ECH