Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2604 ATGTCGACTTCTCaaaaggatacacataagttctTCATGTCAATCAGTGAAGGAGAGAAGAAGTCTTTTGACTTTTTACGTTTTGTATATGATGGGTGCATTGCTGGAGGTGTTGCTGGTGTTATTGTAGAAACAGCTTTATATCCTATTGATACTATAAAAACTCGATTACAGGCTGCCCGTGGTGGAGGGAAAATCATTTTGAAGGGTCTATATTCTGGATTGGCTGGAAATCTTGTTGGTGTTTTACCAGCTTCTGCAATTTTTGTTGGTGTATATGAACCCACAAAGCAGAAACTGCTAGCATCCTTGCCTGAAAATCTCAGCGCTTTGGCTCATCTTTCAATAACTAAGGCTCTCCAAGATTACAATTTGCAAGCTCATGGTTCATCATTCTCTAATGCAATTTTGGGTGCCATTGGAGGTGCTGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGAATGCAAACCGGACAATTTAGTTCAGCCCCTGCTGCTGTCCGTCTTATTGTTGCCAAGGAAGGTTTTAAAGGTCTTTATGCGGGATATGGATCCTTCTTATTGCGAGATTTGCCTTTTGATGCCATACAATTTTGCATTTATGAGCAGCTCCGGATAGGATATAAGCTAGCGGCAAAAAGAGATCTGAACGATCCAGAGAATGCTATGCTTGGTGCTTTTGCTGGTGCTGTAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAAACCAGATTGATGGTTCAGGGATCACAAAATCAGTACAAAGGCATTTCTGATTGTGTGAGGACAATAATCAAAGAAGAAGGAACTCAAGCTCTTTTCAAGGGCATGGGGCCTAGAGTTTTGTGGATAGGCATTGGAGGTTCAATTTTCTTTGGTATTCTTGAGAAGACAAAGCAAATTCTTGCTCACAGGCACCAACAAAAGGAGGCTGAGAAGccaatttcttctttttaa 972 0.3992 MSTSQKDTHKFFMSISEGEKKSFDFLRFVYDGCIAGGVAGVIVETALYPIDTIKTRLQAARGGGKIILKGLYSGLAGNLVGVLPASAIFVGVYEPTKQKLLASLPENLSALAHLSITKALQDYNLQAHGSSFSNAILGAIGGAASSLVRVPTEVVKQRMQTGQFSSAPAAVRLIVAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLNDPENAMLGAFAGAVTGAVTTPLDVVKTRLMVQGSQNQYKGISDCVRTIIKEEGTQALFKGMGPRVLWIGIGGSIFFGILEKTKQILAHRHQQKEAEKPISSF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2604 323 Pfam Mitochondrial carrier protein 31 100 IPR018108 -
Sto8g2604 323 Pfam Mitochondrial carrier protein 224 309 IPR018108 -
Sto8g2604 323 Pfam Mitochondrial carrier protein 130 209 IPR018108 -
Sto8g2604 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 211 IPR018108 -
Sto8g2604 323 PRINTS Mitochondrial carrier protein signature 32 45 IPR002067 GO:0055085
Sto8g2604 323 PRINTS Mitochondrial carrier protein signature 45 59 IPR002067 GO:0055085
Sto8g2604 323 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Sto8g2604 323 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Sto8g2604 323 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 130 317 - -
Sto8g2604 323 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 2 115 - -
Sto8g2604 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 306 IPR018108 -
Sto8g2604 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 120 IPR018108 -
Sto8g2604 323 Gene3D Mitochondrial carrier domain 31 321 IPR023395 -
Sto8g2604 323 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 130 317 - -
Sto8g2604 323 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 2 115 - -
Sto8g2604 323 SUPERFAMILY Mitochondrial carrier 33 301 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2604 Sto-Chr8 18281265 18286731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2604 29 307 EF-hand Containing Proteins AT2G35800 29.965 7.40e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2604 K15111 - nnu:104605501 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2604 8 18281265 18286731 Sto8g2604 8 18281265 18286731 ECH