Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2603 ATGGAACGTGGAGAAAGGAGTGGAATTTGGGTGTCAGGATGGCACAGAATGGGATATACTTACAGCGATGGGTCTTTGATGTCAGAGATGTTAGTGAAAGGCATCAAGAAATTGCATCAACTTGTTGGAAATGCCATTATCACTAATGCAAGTTTCATTATATTTGGTGGTGGGGCCACCCAACTCCTAAACGCTGCCGTTTATGCCTTCTCCTCCAACTCTTCCTCACTTTCTCCAGCCAAAGTGGTTACCACTGCCCCATCTTACCCTGTGTATAAGATACAGACGAAGCTTTTTAATTGTAGGAATAATAGATACGAAGGAGATACATCATTGTGGAAGAATAATAGCGTCTCTCAAATGAATACCACATTTATTGAGTTTGTGACTTCACCAAACAATCCTGATGGCAAATTGAATAAAGCAGTTCTTAATGGTTCAAATGTTAAGACCATTCATGATCTTGCTTATTATTGGCCACATTTCACTGCAATTCCTTCTCCAGCTGATGAAGACCTCATGATCTTCACAATCTCCAAGCTCACTGGCCATGCCGGAACTAGATTTGGTGGATGGATTACAGCTTATGCATGGTTGAAGTGTGAAAGAGAGGAAGACGAAAATTGCTATGAAATATTAAAAGCAGCTAAAATAGAAGGGCGTGAAGGAAGTTCGTACGGTGCTTATGATCGTTACGTGCGTTTAAGTCTTATCGGAAGCCAAGATGACTTTGAGATATTGATAGATCTGAGATTGTACAACACTGAAAGATACCGAACGAGAGAGAATAAATTCCGAGTGCGAGCCTCAAAAACAGTGTATCTCACCCACTCTTTCTTTCTCTGGAGTTTGAATTCTCTATTGTTCATGCTTGTGCGGTTTGAATTTAACCACGAGACATGGGAGCCTAGTTGGAGCAGAGGAGCAGCAAAAGAAGCAGAGAAGGTGGCAGGCATAGAATGTTCAGGACATGGAAGAGCTTACTTGGATGGTTTGATTCTTAATGGCCATAATCAACCTCTTTGTGACTGCAATACTTGCTATGCTGGCCCTAATTGCTCACTCTTTTTGTCCAATTGCTCTGCACATGCTGAAAGTGGGGATCCATATTTCTTGGAGCCATTCTGGATGGGAAGAGCAGAGAGTAGTGGGATATTGGTGTCAGGTTGGCACAGAATGGGATACAATTTTATGAATGATGGCTCTCTCATCTCTGAGATGTTAGTGAAGTACATCAACAAACTGCATCATGTAGTTGGAAATGCTATCATCAGTAAGAATGGCAGTTTCATTGTATTTGGTTGTGGCTCCACTCAACTCCTAAACGCTGCCGTTTATGCCTTCTCCCCTAACTCTTCCATGGATTCTCCAGCCAAAGTGGTTACCTCTGCCCCATATTACCCTATATACAGGACACAAATGCAGCTTTTTAACTCAAGGGATTATAGATACGAAGGAGATACATCATTGTGGAAGAATAATAGCTTCTCTCAAATGAATACCACATTTATTGAGTTTGTGACTTCACCAAACAATCCTGATGGCAAATTGAATAAAGCAATTCTTAATGGTTCTAATGTTAAGACCATTCATGATTTTGCTTATTTTTGGCCACATTTCACTGCCATTCCTTCTCCAGCTGATGAGGACCTTATGATCTTCACAATCTCCAAGCTCACTGGCCATGCTGGAACTAGATTTGGGTGGGCGATCATTAAGGATAAGGGTGTGTACGAAAGAATGTCAAGTTATTTGAGCTTAAACACCATGGGAGTTTCTCGAGATGCTCAATTGAGAGCTTTGAAGCTTCTGGGCGTAGTGCTTGAAGGTGATGGAACACAATTATTCAAATTTGCATATTCAACCATGAAAAATcgatggactaaattgaaagagatTTTCTCAAACTCCAAACGTTTTTCTCTACAGAAACTATCTCCAGAGTATTGCACCTTTTTCAAAACTTCTAGGGATCCTACTCCAGcTTATGCATGGGTGAAGtgtgaaagagaagaagatagaAATTGCTATGAAATATTGAAAGCAGCAAAAATAGAAGGACGTGAAGGAAGTTTGTACAGTGCTGAGGATCGCTATGTGCGTTTAAGTCTTATCAAAACCCAAGATGACTTTGACATATTGATTAACTATCTCACAAAACTTGTTCATCAAGAATAG 2178 0.3976 MERGERSGIWVSGWHRMGYTYSDGSLMSEMLVKGIKKLHQLVGNAIITNASFIIFGGGATQLLNAAVYAFSSNSSSLSPAKVVTTAPSYPVYKIQTKLFNCRNNRYEGDTSLWKNNSVSQMNTTFIEFVTSPNNPDGKLNKAVLNGSNVKTIHDLAYYWPHFTAIPSPADEDLMIFTISKLTGHAGTRFGGWITAYAWLKCEREEDENCYEILKAAKIEGREGSSYGAYDRYVRLSLIGSQDDFEILIDLRLYNTERYRTRENKFRVRASKTVYLTHSFFLWSLNSLLFMLVRFEFNHETWEPSWSRGAAKEAEKVAGIECSGHGRAYLDGLILNGHNQPLCDCNTCYAGPNCSLFLSNCSAHAESGDPYFLEPFWMGRAESSGILVSGWHRMGYNFMNDGSLISEMLVKYINKLHHVVGNAIISKNGSFIVFGCGSTQLLNAAVYAFSPNSSMDSPAKVVTSAPYYPIYRTQMQLFNSRDYRYEGDTSLWKNNSFSQMNTTFIEFVTSPNNPDGKLNKAILNGSNVKTIHDFAYFWPHFTAIPSPADEDLMIFTISKLTGHAGTRFGWAIIKDKGVYERMSSYLSLNTMGVSRDAQLRALKLLGVVLEGDGTQLFKFAYSTMKNRWTKLKEIFSNSKRFSLQKLSPEYCTFFKTSRDPTPAYAWVKCEREEDRNCYEILKAAKIEGREGSLYSAEDRYVRLSLIKTQDDFDILINYLTKLVHQE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2603 725 Pfam Alliinase EGF-like domain 304 360 IPR006947 GO:0016846
Sto8g2603 725 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 194 249 - -
Sto8g2603 725 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 190 - -
Sto8g2603 725 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 279 725 - -
Sto8g2603 725 PANTHER TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3 194 249 - -
Sto8g2603 725 PANTHER TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3 1 190 - -
Sto8g2603 725 PANTHER TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3 279 725 - -
Sto8g2603 725 SUPERFAMILY PLP-dependent transferases 308 722 IPR015424 -
Sto8g2603 725 Gene3D - 404 613 IPR015421 GO:0003824
Sto8g2603 725 Gene3D - 27 214 IPR015421 GO:0003824
Sto8g2603 725 SUPERFAMILY PLP-dependent transferases 194 249 IPR015424 -
Sto8g2603 725 SUPERFAMILY PLP-dependent transferases 2 193 IPR015424 -
Sto8g2603 725 CDD AAT_like 366 718 - -
Sto8g2603 725 Pfam Allinase 363 722 IPR006948 GO:0016846
Sto8g2603 725 Pfam Allinase 2 190 IPR006948 GO:0016846
Sto8g2603 725 Pfam Allinase 195 249 IPR006948 GO:0016846
Sto8g2603 725 Gene3D - 303 403 IPR037029 GO:0016846
Sto8g2603 725 Gene3D Aspartate Aminotransferase, domain 1 614 723 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2603 Sto-Chr8 18266909 18274970 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2603 - - gmx:100782177 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2603 8 18266909 18274970 Sto8g2603 8 18266909 18274970 ECH