Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2600 ATGAttgcaataatattaatattgttatCTTCTTCCTCAAACATGTTTGTTTGTGGAGAGACATGGGAGCCTAGTTGGAGCAAAGAAGCAGCAAAAGAAGCAGAGAAGGTGGCAGCTATAGAATGTTCAGGACATGGAAGAGCTTACTTGGATGGTATTGTTCTTAATGGCCATCAACCTCTTTGTGAGTGCAATCCTTGCTATGCTGGCCCTAATTGCTCACAATTTATATCAAATTGCTCTGCAAATGCTggaagCGGGGATCCATATTTCTTGGAGCCATTCTGGATGGAGCGTCCAGAGAAGAGTGGGATTTTGGTATCGGGATGGCACAGAATGGGATATACTTACAGCGATGGCTCTTACATCTCAGAGATGTTAGTGAAGCACATCAAGAAATTGCATCAACTCGTTGGAAATGTAGTGACGGATGGAAGATTCGTTGTATTTGGTGGTGGCTCTACTCAACTCCTAAACGCCGCCGTTTATGCCTATTCTCCCGATTCTTCTTTACAATCTCCAGCCAAAGTGGTTGCCACTGCCCCATATTACCCTGTATATAGGACACAAACACAGCTTTTTAACTCGAGGGATAACAGATACGAAGGAGACACATCAATATGGAAGCAGAATGCGTCAAGTGTGAATGCGACATTTATTGAGTTCGTGACTTCTCCAAATAATCCAGATGGGAAATTGACGAAGCAAATTCTGAATGGTTCGAATGTAAAGACCATTAACGATCTTGCTTATTATTGGCCACATTTCACTGCCATTCCTTCTCCAGCTGAtcaagacctcatcatcttcacAATCTCCAAGGTCACTGGCCATGCCGGAACTAGATTTGGgtGGGCAATTATAAAGGATGAGGGTGTGTATGAAAAGATGTTGAGCTATTTGGACTCAAACACCATGGGAATTTCTCGAGAAGCTCAATTGAGAGCTCTGAAACTTCTGGACGTGGTGCTTGAAGGTGATGGAAAGCAATTATTCAAATTTGCATATTCAACCATGAAAAATcgatggactaaattgaaagaaattttCTCAAAGTCTAAACGTTTTTCTCTACAAAAACTATCTCCAGAGTATTGCACCTTTTTCAAAAGGTCTAGAGATCCTACTCCAGcTTATGCATGGGTGAAGtgtgaaagagaagaagatgaaaattgcTATGAAATACTGAAAGCAGCAAAAATAGATGGACGTGGAGGAAGTTTGTACAGTGCTGAGGATCGCTACGTGCGTTTGAGTCTTATTAGAAGCCAAGATGACTTTGATATATTGATTAACTATCTCACCAAACTTATTGATcaggaataa 1326 0.3816 MIAIILILLSSSSNMFVCGETWEPSWSKEAAKEAEKVAAIECSGHGRAYLDGIVLNGHQPLCECNPCYAGPNCSQFISNCSANAGSGDPYFLEPFWMERPEKSGILVSGWHRMGYTYSDGSYISEMLVKHIKKLHQLVGNVVTDGRFVVFGGGSTQLLNAAVYAYSPDSSLQSPAKVVATAPYYPVYRTQTQLFNSRDNRYEGDTSIWKQNASSVNATFIEFVTSPNNPDGKLTKQILNGSNVKTINDLAYYWPHFTAIPSPADQDLIIFTISKVTGHAGTRFGWAIIKDEGVYEKMLSYLDSNTMGISREAQLRALKLLDVVLEGDGKQLFKFAYSTMKNRWTKLKEIFSKSKRFSLQKLSPEYCTFFKRSRDPTPAYAWVKCEREEDENCYEILKAAKIDGRGGSLYSAEDRYVRLSLIRSQDDFDILINYLTKLIDQE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2600 441 Gene3D - 124 329 IPR015421 GO:0003824
Sto8g2600 441 SUPERFAMILY PLP-dependent transferases 26 439 IPR015424 -
Sto8g2600 441 Gene3D - 24 123 IPR037029 GO:0016846
Sto8g2600 441 CDD AAT_like 83 434 - -
Sto8g2600 441 Pfam Allinase 83 437 IPR006948 GO:0016846
Sto8g2600 441 Gene3D Aspartate Aminotransferase, domain 1 330 439 IPR015422 GO:0003824
Sto8g2600 441 Pfam Alliinase EGF-like domain 25 80 IPR006947 GO:0016846
Sto8g2600 441 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 441 - -
Sto8g2600 441 PANTHER TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2600 Sto-Chr8 18240246 18246742 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2600 - - gmx:100782177 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2600 8 18240246 18246742 Sto8g2600 8 18240246 18246742 ECH