Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2599 aTGAGAAATGCAATGGAAGAAGCAGAAGCTGTGGCTTCTATGTCATGCTCTGGGCATGGAAGGGCCTTCTTGGATGGAGTGCTTCTTCATGGTGTGCCTGTTTGTGAGTGCAATGCTTGCTATGGTGGTCCTCGTTGTTCTCAGCTTTTGCCCCATTGCATGGTTGATGCAGATAGTGGGGATCCAACATTCATGGAGCCATTTTGGGTGAAGAATGCAGGAAGTAGTGCAATAGTGATACCAGGGTGGCATCGGATGAGCTATGAATTCAATGATGGCTCTCTAATCTCAAAAGAGCTAAAGAAACACATAGAGACAGTGCATTCCATTGTAGGAAATGCCATAACTGAAGGAAAGTACATTGTGTTTGGAAATGGAGCCACTCATCTTCTTCATGCAGCCATACATGCACTTTCTTCCCAAACtcaccattcttcttcttcttcttcttcacccaCAAAGGTGGTAGCTTCCATCCCCTATTACCCGgtTTATAAAGAGCTAACTGAGTTCTTTAATTCGGAAGATTACAAGTTCAATGGGGACACTGCAATGTGGAAGAAGAAATTAGAAGGATTGAACTCAAGCTTCATTGAGCTGGTGACATCCCCAAATAATCCAGATGGGAAATTGAAGGAAGGTGTTCTTGAAGGGCCTTTTGTGAAGAAAGTTCATGATCTTGCTTACTATTGGCCTCATTTCACACCCATTCCACATCCTGCAGATGAAGATGTTATGATCTTCACCTTGTCTAAGCTCACTGGTCATGCCGGAAGCAGATTTGGGTGGGCAATAGTGAAGGATGAAGCTGTTTACCAAAAGATGTTGAGATACATGGACTTAAGCACATATGGAGTATCAAGGGAGACACAATTAAGAGTTCTAAAGCTTCTAAAAGTGGTTCTCAATGGAAATGGAAGAGAAATGTACGAATTTGGACATAACACAATGAGCAGAAGATGGATCCGATTGACCAAAGTTTTGTCTCACTCAAAACGATTTTCCATTCAACAACTTGAACCACAATATTGTTCATTATTCCAGCAATGTGAAAGAGAGGAAGATAGAGACTGCTATCAAGTGCTTAAACAATACAAAGTCACCGGCCGAGCCGGTAGCCTGTTCGGTGCAGATGATCGCTACGTGCGTCTAAGTTTGGTGAAAAGCGACGACGATTTCGATTTATTGTTGCAACAGTTGAAGAAAATCGTTGCTGTTTCTGAAGAACAGGAGGAAAAGCTTCTTATTATGCCTTTGCCTTCAAACGCAACGAGAAAAGGCAACGACTCTGTGCTAATAACCAACTACATAGAGTGGCATTTCTTCCATAACAACGAACTTGGCCATGCTTCTCAACTCCAAATAGAGATTGAAGGGCTCAAGTTGTATCTTGTCCCGATGAAGTCAAAATTTCCAATTGTTCCTACAAAGAAAATAGTGGAGCACGATATCGCGGTGTGGCACGGTGCTGCATCGCGGTGGCGCAATGAGCTTGACGGTGGCGATGCGAGGCATCGCGTCAATGTGCGTTTTGGAGAGCTAAGGTGGAGGCTAGGTTTTGAACGCTTATGGGCGACGACCACGATGCATCGCCGTGGTGAGATCGGCGGGATGCTGTGTGATGGAAGTGTGCGGCGAAGATAA 1644 0.4337 MRNAMEEAEAVASMSCSGHGRAFLDGVLLHGVPVCECNACYGGPRCSQLLPHCMVDADSGDPTFMEPFWVKNAGSSAIVIPGWHRMSYEFNDGSLISKELKKHIETVHSIVGNAITEGKYIVFGNGATHLLHAAIHALSSQTHHSSSSSSSPTKVVASIPYYPVYKELTEFFNSEDYKFNGDTAMWKKKLEGLNSSFIELVTSPNNPDGKLKEGVLEGPFVKKVHDLAYYWPHFTPIPHPADEDVMIFTLSKLTGHAGSRFGWAIVKDEAVYQKMLRYMDLSTYGVSRETQLRVLKLLKVVLNGNGREMYEFGHNTMSRRWIRLTKVLSHSKRFSIQQLEPQYCSLFQQCEREEDRDCYQVLKQYKVTGRAGSLFGADDRYVRLSLVKSDDDFDLLLQQLKKIVAVSEEQEEKLLIMPLPSNATRKGNDSVLITNYIEWHFFHNNELGHASQLQIEIEGLKLYLVPMKSKFPIVPTKKIVEHDIAVWHGAASRWRNELDGGDARHRVNVRFGELRWRLGFERLWATTTMHRRGEIGGMLCDGSVRRR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2599 547 PANTHER TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 4-LIKE 2 409 - -
Sto8g2599 547 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 409 - -
Sto8g2599 547 Gene3D Aspartate Aminotransferase, domain 1 308 405 IPR015422 GO:0003824
Sto8g2599 547 Gene3D - 1 96 IPR037029 GO:0016846
Sto8g2599 547 Gene3D - 97 307 IPR015421 GO:0003824
Sto8g2599 547 Pfam Allinase 55 404 IPR006948 GO:0016846
Sto8g2599 547 SUPERFAMILY PLP-dependent transferases 4 404 IPR015424 -
Sto8g2599 547 Pfam Alliinase EGF-like domain 2 53 IPR006947 GO:0016846
Sto8g2599 547 CDD AAT_like 55 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2599 Sto-Chr8 18224871 18233550 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2599 - - gmx:100809653 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2599 8 18224871 18233550 Sto8g2599 8 18224871 18233550 ECH