Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2234 ATGGGTACTGCGTGGGGTCCTCCATGGCTGAGGTTGTGCATGGTGGTGGTAATAATCCAGTGCGGGGCGGCTGCAGGCGGGGGATTAGACACAGGTGGGTTGAGCAGAGACGCCTTCCCGAAGGGCTTCGTCTTCGGAACCGCCACGTCGGCTTATCAGGTCGAAGGTATGGCCCACAAAGATGGGCGTGGGCCCAGCATTTGGGATGTTTTCATCCAGAAACCCGGGATTGTTGCAAATAATGGCACGGGAGATGTTTCGGTGGATCAGTATCATCGTTACAAAGAAGATGTGGACATCATGGCAAATCTGAACTTCGATGCATACAGATTTTCCATTTCATGGTCCAGAATTTTCCCAAGCATTACTCCATATGCAAATCTGTACCATTATGACCTTCCTTTAGCTCTAGAATTGAGATACAAAGGACTCTTGAGCCACAATGTAGTCAAAGATTTTGCAGATTATGCAGAGTTTTGTTTCAAGACTTTTGGAGACAGAGTGAAGAACTGGATGACATTTAATGAGCCTAGAGTTGTGGCAGCTCTTGGATATGATAATGGATTTTTCGCTCCCGGAAGGTGCTCGAGAGCTTACGGAAATTGTTCGGCTGGGGATTCTGCCACCGAACCTTACATTGTCGCGCACAATTTGATATTGTCACACGCAGCCGCGGTTCAGAGATATCGAGAGAAGTACCAGGAAAAACAAAAGGGAAGGATTGGAATTCTTTtggattttgtttggtatgagcCTCTTACAAGATCAAAGGCTGATAACTATGCAGCTCAGAGAGCTAGGGACTTTCATGTTGGATGGTTCATTCATCCTATTGTATATGGGGAGTATCCAAGAACAATGCAAAATATTGTTGGGAAAAGGCTCCCAAAGTTCACCAAGGAGGAAGTTAAGATGGTAAAGGGTTCGATGGATTTTGTTGGTATCAACCAATATACTACTTACTACATGTATGATAACCATCAACCAAAACCAAAATTCCCTGGTTACCAACAAGATTGGAATGCTGGATTTGCTTATGCAAAGAATGGAGTGCCTGTTGGACCAAGAGCATACTCATATTGGCTCTATAATGTGCCATGGGGAATGTACAAAGCACTAATGTACATCAAGGAACGTTATGGAAACCCCACTGTGATCTTATCAGAAAATGGGATGGACGATCCGGGGAACGTAACGCTTCCTAAGGGTTTGCATGACACCACAAGGATGAACTTCTACAAAGGCTACCTGACTCAACTAAAGAAGGCACATGATGAAGGAGCAAATGTGGTTGGCTATTTTGCATGGTCATTGCTTGACAATTTTGAATGGAGATTGGGATACACATCAAGGTTTGGCATTGTCTATGTTGACTTCAAAACCCTCAAGAGATACCCTAAGATGTCTGCATATTGGTTTAAGCAGCTACTTACCAGAAAGAAGCAGTGA 1449 0.4375 MGTAWGPPWLRLCMVVVIIQCGAAAGGGLDTGGLSRDAFPKGFVFGTATSAYQVEGMAHKDGRGPSIWDVFIQKPGIVANNGTGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPSITPYANLYHYDLPLALELRYKGLLSHNVVKDFADYAEFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSRAYGNCSAGDSATEPYIVAHNLILSHAAAVQRYREKYQEKQKGRIGILLDFVWYEPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPRTMQNIVGKRLPKFTKEEVKMVKGSMDFVGINQYTTYYMYDNHQPKPKFPGYQQDWNAGFAYAKNGVPVGPRAYSYWLYNVPWGMYKALMYIKERYGNPTVILSENGMDDPGNVTLPKGLHDTTRMNFYKGYLTQLKKAHDEGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFKTLKRYPKMSAYWFKQLLTRKKQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2234 482 PANTHER GLYCOSYL HYDROLASE 25 121 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 PANTHER GLYCOSYL HYDROLASE 122 479 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 PANTHER BETA-GLUCOSIDASE 44 122 479 - -
Sto8g2234 482 PANTHER BETA-GLUCOSIDASE 44 25 121 - -
Sto8g2234 482 SUPERFAMILY (Trans)glycosidases 34 478 IPR017853 -
Sto8g2234 482 PRINTS Glycosyl hydrolase family 1 signature 309 323 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 PRINTS Glycosyl hydrolase family 1 signature 385 393 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 PRINTS Glycosyl hydrolase family 1 signature 406 417 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 PRINTS Glycosyl hydrolase family 1 signature 427 444 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 PRINTS Glycosyl hydrolase family 1 signature 451 463 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 Pfam Glycosyl hydrolase family 1 36 121 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 Pfam Glycosyl hydrolase family 1 122 481 IPR001360 GO:0004553|GO:0005975
Sto8g2234 482 Gene3D Glycosidases 26 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2234 Sto-Chr8 14797730 14802088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2234 23 482 Glycoside Hydrolase AT3G18080 76.495 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2234 K05350 - gmx:100814740 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2234 8 14797730 14802088 Sto8g2234 8 14797730 14802088 ECH