Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2222 atgATATCTCTTATGTTTGTGGGTCATCTTGGAGAATTTCCCCTTTCTGCTGCTTCAATGGCTACTTCTTTTCTCAATGCTTCTGGTACCTGTGTCTTGATGGGAATGGCAAGTGCCTTGGACACATTTTGTGGTCAATCATATGGAGCAAAGAAATATGATGCACTTGGCATACACTTGCAAAGAGGCATGTTGGTTTTATTACTTGTGACTATTGCTCAATCCCTTATTTGGGCAAACTTAACACCTATTCTAGTTGCTCTCCATCAAGACCACAATATAGCACAAGAAGCTGGAGTATATGCTCGTTATATGATTCCAAGCCTTCCTGCCAATGCTCTTCTTCAGTGCAATATTAAGTTTCTTCAAAACCAGAACATAGTCTTGCCTATGGTCCTAACTACTGGAATTTCAAGCTTAATGCACATCTTTTTCTGTTGGGTTTTGGTCCTAAAATCTGGGCTTGGCATTAAAGGAGCTGCCATAGCAATTTGCATCTCTAGTTGGATTAGTATGATGTTGCTAGCACTTTAcatcaagttctctccttcatGCAAGAAAACTTGGACTGGATTTTCATGGGAGTCTTTGCATAATATCCCACAATTTGTCAGGCTGGCTCTTCCTTCAGCTGTCATGGTTTGCTTAGAATCTTGGACATTTGAACTAATGGTGATTCTGTCTGGCACTTTTCCTAATCCAAAACTGCAAACTTCAGTTTCTTCTATATGCCTTAGCACATCTGGTATGTTTTGGATGATACCCTTTGGAATTGGTGCTGCCGCAAGTACAAGGACCTCAAATGAACTAGGGGCTGGAAGTCCAGAAGCTGCATATTTGGCTGTTAAAGTGACCTTATTCATGGCCCTCACAGCAGGAATTTCAGAATTTTCTCTGCTAATGCTGATAAGAAACATTTGGGGAGGTGCATTTACTAATGTACATGAAGTGGTGACATATGTAGCATCCATGATCCCAATTGTTGCAACTATTGCCTTTGTGGATTCAATTCAAACTGTACTCTCAGGTGTAGCCAGAGGCTGTGGTAGGCAGAAACTTGGTGCATTTGTGAATCTTGGCTCATATTATCTTGTGGGAGTTCCCTTGGCTGTAGTCTTTTCTATTGTCCTCCACATGAAAGTAAAGGGCCTCTGGTTAGGGATCACACTAGCCGTTACTGTGCAAGCTGTTTGTCTTCTTCTGATGATCGCATGCACCAATTGGGAGAAAGAAGCAGAGAAGGCTGCAACGAGGGTACAGCGTCCCAGAGTCTTAGCAAGTAGCGAAATTGTTACTACTCAGTTGCAGAACCTTCATTCTGAATCTTAA 1329 0.4116 MISLMFVGHLGEFPLSAASMATSFLNASGTCVLMGMASALDTFCGQSYGAKKYDALGIHLQRGMLVLLLVTIAQSLIWANLTPILVALHQDHNIAQEAGVYARYMIPSLPANALLQCNIKFLQNQNIVLPMVLTTGISSLMHIFFCWVLVLKSGLGIKGAAIAICISSWISMMLLALYIKFSPSCKKTWTGFSWESLHNIPQFVRLALPSAVMVCLESWTFELMVILSGTFPNPKLQTSVSSICLSTSGMFWMIPFGIGAAASTRTSNELGAGSPEAAYLAVKVTLFMALTAGISEFSLLMLIRNIWGGAFTNVHEVVTYVASMIPIVATIAFVDSIQTVLSGVARGCGRQKLGAFVNLGSYYLVGVPLAVVFSIVLHMKVKGLWLGITLAVTVQAVCLLLMIACTNWEKEAEKAATRVQRPRVLASSEIVTTQLQNLHSES 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2222 442 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 419 - -
Sto8g2222 442 CDD MATE_eukaryotic 1 414 IPR045069 GO:0042910|GO:1990961
Sto8g2222 442 TIGRFAM matE: MATE efflux family protein 1 385 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto8g2222 442 Pfam MatE 209 372 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto8g2222 442 Pfam MatE 1 148 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto8g2222 442 PANTHER PROTEIN DETOXIFICATION 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2222 Sto-Chr8 14704571 14709320 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2222 K03327 - gmx:100816863 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2244 8 14909654 14912427 Sto8g2222 8 14704571 14709320 ECH
Sto8g2222 8 14704571 14709320 Sto8g2222 8 14704571 14709320 ECH