Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2215 ATGTGGAGAGAAGAAGAGGACGAAGATGCATCTTTAAGATCTCGTTTGATTCAAAATGcacatgaagatgatgatgatggattgAAAGTTGTTGATGTAGAGCGAAACAAGGAAAATGCAGCGAAGAAGACCAACGTTTTAGAAGAAGTGTGGAAGCAATTATGGCTAGCAGGACCATTGATATGTGTGAGTCTGTTAAATTATTGCCTGCAAGTTATATCTCTTATGTTTATTGGTCGTCTCGGCGAATTACCTTTTTCTGGTGCTTCAATGGCTACCTCTTTTGCCTCTGTGACTGGTTCAAGCTTATTGAAAGGAATGGCAAATGCATTGGATACATTGTGTGGGCAGTCATATGGAGCAAAGCAGCACCACATGTTAGGCATACACATGCAGAGATCCATGCTTGTTTTAACAATAGTTAGCATTCCTCTTTCAGTTGTTTGGGCTAACACAAGGCCTCTTCTAATTGCTTCTGGCCAAGATCCTGAAATATCTGAAAAAGCTGGGAAGTATGCTATTCTAATGATTCCAAGTCTTTTTCCCTATGCTCTTCTTCAGTGCCTCAACAGATTCCTAAAATCCCAAAACATTGTGTTTCCGATGGTGTTCAGCTCTGGGTTTACTACTTTGCTGCATGTTGTTGTGTGTTGGCTTTTGGTATTCAAATCTGGATTGGGGTATAGAGGACCTGCTTTAGCCAATGCTATATCTTATTGGGTTAATGTTTTGGTATTAGCACTCTATGTCAAGTTTTCTCCTTCATGTTCAGAAACTTGGACTGGCTTTTCTAGAGAGGCATTTCAAAACATCCCTTCTTTTTTGGATCTTGCCATTCCTTCTGCTGTTATGATTTGTAATATTTTTCAAGCTTGGTTTCCCATTGTGCTTTGTACTGTGATGAGCAGCTTGGAAACTTGGTCTTTTGAAATGGTGGTTCTCCTATCTGGTCTTCTTCCAAATCCAAAGTTGGAAACATCAGTTCTTTCTATCTGCTTGAATACTTCAGCAATTTTTTGGGTGATCCCACTTGGACTTGGTGCAGCCATAAGCACTCGTGTGTCCAATGAACTAGGAGCTGGTAATCCCAGAGCTGCACGTTCAGCAGTGTATGTTGTCCTAATAATGGCCATTATTGTGGGCATCTTAGTTGGAGCAGTGATGATACTAATACGCAATGTTTGGGGATATGCATATAGTAATGATGAACAAGTGGTTCAATATGTAGCATCAATGTTGCCAATTCTTGCAGCATCCAACTTCGTGGATGGACTCCAATCTGTCCTTACAGgcaCAGCCAGAGGATGTGGTAGGCAGAAAACAGGTGCTTTTGTGAATCTAGGATCATACTATATAATTGGAATTCCATCTGCTATGTTATTCACCTTTGTGTGGCACATTGGTGGGAAGGGTTTGTGGCTGGGGATCCTATGTGCACTTGTTGTTCAAGTGTCATGTCTTTTGACCATTACAATACGTACTGACTGGGAAGAAGAGgCGAAGAAGGCTAGAGACTCCTTGATTCAATAa 1530 0.402 MWREEEDEDASLRSRLIQNAHEDDDDGLKVVDVERNKENAAKKTNVLEEVWKQLWLAGPLICVSLLNYCLQVISLMFIGRLGELPFSGASMATSFASVTGSSLLKGMANALDTLCGQSYGAKQHHMLGIHMQRSMLVLTIVSIPLSVVWANTRPLLIASGQDPEISEKAGKYAILMIPSLFPYALLQCLNRFLKSQNIVFPMVFSSGFTTLLHVVVCWLLVFKSGLGYRGPALANAISYWVNVLVLALYVKFSPSCSETWTGFSREAFQNIPSFLDLAIPSAVMICNIFQAWFPIVLCTVMSSLETWSFEMVVLLSGLLPNPKLETSVLSICLNTSAIFWVIPLGLGAAISTRVSNELGAGNPRAARSAVYVVLIMAIIVGILVGAVMILIRNVWGYAYSNDEQVVQYVASMLPILAASNFVDGLQSVLTGTARGCGRQKTGAFVNLGSYYIIGIPSAMLFTFVWHIGGKGLWLGILCALVVQVSCLLTITIRTDWEEEAKKARDSLIQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2215 509 PANTHER PROTEIN DETOXIFICATION 33 503 - -
Sto8g2215 509 TIGRFAM matE: MATE efflux family protein 59 473 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto8g2215 509 CDD MATE_eukaryotic 49 502 IPR045069 GO:0042910|GO:1990961
Sto8g2215 509 Pfam MatE 59 219 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto8g2215 509 Pfam MatE 300 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto8g2215 509 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2215 Sto-Chr8 14668315 14672379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2215 K03327 - gmx:100792588 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2215 8 14668315 14672379 Sto8g2215 8 14668315 14672379 ECH