Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2204 ATGCTGTCTGAGATGCCCGAAGTAACAGAATTACACCCTGTGCCTGATGCACATGTTCCAGTGATGAAATTCAAGTTTAATGGTGTTTCCATAGATCTCCTTTATGCGAAGTTGTCCTTGTGGGTTATTCCAGAAGACTTAGATATATCACAGGACTCAATATTACAAAATGCAGATGATCAAACTGTTCGTAGTCTTAATGGTTGTAGGGTTACTGATCAGATCTTGCGCTTGGTTCCAAATATTCAGAATTTTCGTACAACATTAAGATGTATGAGATTGTGGGCAAAGCGCCGTGGTGTTTATTCAAATGTTTCGGGTTTTCTTGGTGGGATAAATTGGGCATTGCTTGTTGCTCGAATATGCCAGCTTTATCCTAATGCACTGCCTAATATGTTAGTATCTCGGTTCTTCCGGGTATATACTCAGTGGCGATGGCCGAACCCAGTGATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTTCAAGTATGGGATCCTAGAAGATATCCCAAGGATAGATTCCATCTAATGCCCATAATTACCCCTGCATATCCTTGTATGAACTCTAGCTACAATGTCTCATCAAGTACTCTGCGTATCATGTCAGAGGAATTTCAAAGGGGAAGTGAAATATGTGAGGCTATGGAAGCAAGCAAAGCTGAGTGGGATAATCTTTTTGAGCCTTATCCCTTTTTTGAAGCTTATAAGAATTATCTACAAATAGACATTAGTGCAGAGAATGCTGATGATCTTAGAAAATGGAAAGGCTGGGTTGAGTCTAGGCTTCGCCAGCTGACATTGAAGATTGAGAGGCACACATATGGCATGCTTCAATGCCATCCACATCCTGGTGATTTTTCAGACAAATCTAAACCTTTCCACTGTAGTTACTTCATGGGTCTGCAGCGTAAGCAAGGAGTCCCAGTAAATGAAGGTGAACAATTTGATATAAGGCTAACTGTTGAAGAATTTAAGCATTCTGTCAACGTGTACACTTTATGGAAACCTGGAATGGAAATTCGCGTATCCCATGTGAAGCGTCGGAATTTACCTACCTTTGTATTTCCTGGTGGTGTTCGACCTTCCCGTCCATCAAAAGTTACTTGGGATAGCAAGCGGAGTTCAGAATTGAAGGTTTCTGGTCAGGGTCAAGAAAAATCTCATGAAGGTAGAGCAGCATCTGTATGTGGAACAGAagatgaaaagaagagaaagcgAACAGATGATGACTTGGATGATAACATGAGAAGTTCTAAGCCTTTTGCATCTTTACCTTCTTCCAGCAGGGAAATTCATGAGGATAGAACTATTAGCACTGCTAGTTCTTGTTCTATAAAATGTGTTGAATCAGAAGCCAATGGTACAGGCCTGCAGAAGAGCGAGAAGCCTGAATTGAAATTTGGAGGGGAGGTATCATCTGAGAAGAGTGAGATTAATGGATCAGGGAGTTGCAATCCACAGGTCAACCTTGTACTTGCTTCTACTGATACATCCAATTCTAAAGAAGCAGAAAATCTGGCTATTGAGAAGATTATGTCCGGTCCATATGATGCGCACCAAGCTTTTCCAGAAGAACCTGATGAGCTTGAAGATGAACTTGAGTATACAAATCAAGTCAAAGATGATGGAGGAGACCTGAAAAGCATTAGCTTGGACTCTTTAAACTCGAAGCCTGTAGTGGCAGCAGAGCCAGTTATTTCAAACAACGAAATGACTTGTTCTACTCATTTATCTTCTAATGGGGGATTGGAGGAGCTTGAGCCTGCTGAACTGACAGCACCATTGTTAAGTGGGACTCCTGCACCTGTGCCGCAGCGGAAGCCTTTGATAAGGTGA 1839 0.4138 MLSEMPEVTELHPVPDAHVPVMKFKFNGVSIDLLYAKLSLWVIPEDLDISQDSILQNADDQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRLWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFQRGSEICEAMEASKAEWDNLFEPYPFFEAYKNYLQIDISAENADDLRKWKGWVESRLRQLTLKIERHTYGMLQCHPHPGDFSDKSKPFHCSYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNVYTLWKPGMEIRVSHVKRRNLPTFVFPGGVRPSRPSKVTWDSKRSSELKVSGQGQEKSHEGRAASVCGTEDEKKRKRTDDDLDDNMRSSKPFASLPSSSREIHEDRTISTASSCSIKCVESEANGTGLQKSEKPELKFGGEVSSEKSEINGSGSCNPQVNLVLASTDTSNSKEAENLAIEKIMSGPYDAHQAFPEEPDELEDELEYTNQVKDDGGDLKSISLDSLNSKPVVAAEPVISNNEMTCSTHLSSNGGLEELEPAELTAPLLSGTPAPVPQRKPLIR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2204 612 SUPERFAMILY Nucleotidyltransferase 1 78 IPR043519 -
Sto8g2204 612 MobiDBLite consensus disorder prediction 355 436 - -
Sto8g2204 612 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 231 357 IPR011068 GO:0003723|GO:0016779|GO:0031123
Sto8g2204 612 MobiDBLite consensus disorder prediction 576 612 - -
Sto8g2204 612 Gene3D Poly(A) polymerase predicted RNA binding domain 231 346 - -
Sto8g2204 612 Gene3D - 48 229 - -
Sto8g2204 612 SUPERFAMILY PAP/OAS1 substrate-binding domain 80 229 - -
Sto8g2204 612 MobiDBLite consensus disorder prediction 393 417 - -
Sto8g2204 612 Pfam Poly(A) polymerase predicted RNA binding domain 232 290 IPR007010 GO:0003723|GO:0043631
Sto8g2204 612 Pfam Poly(A) polymerase predicted RNA binding domain 289 363 IPR007010 GO:0003723|GO:0043631
Sto8g2204 612 Pfam Poly(A) polymerase central domain 39 229 IPR007012 GO:0004652|GO:0043631
Sto8g2204 612 PANTHER POLY A POLYMERASE 1 584 - -
Sto8g2204 612 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2204 Sto-Chr8 14575259 14580231 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2204 K14376 - gmx:100816915 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2204 8 14575259 14580231 Sto8g2204 8 14575259 14580231 ECH