Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2173 ATGGCGGGTTCTTCGATTATGGACAATCTTTTCCAACAGACTTTGGAGGATTTGATCAAAGGTTTCCGCCtcaaactcattggcgaatcaGCCTTAGTATCGAAATCCATGGAGGACATTCACCGTGAGATAAAGTCAACCGATCCCCACACCAAGTCCACTGCTCTTCAGAAGCTATCTTACCTCAGTGGAATTTACGGTGTCGATATGTCTTGGGCTGCTTTTCACGTCATCGAGGTTATGTCCTCTTCCCGCTTTGCCCACAAGAGGGTAGGGTATTTTGCTGCGTCTCAATCCTTTCATGAGGGCACGTCTGTTCTCCTCCTCATCACCAACCAGCTTCGCAAAGATCTCTCCAGTACTAACGAATTCGAGGTAAGCTTAGCCCTTGAATGCTTATCAACAATTGGTACGGTTGATCTTGCTAGAGACTTGACCCCTGATGTGTTCACATTACTGTCTACTAGTAAGGCTTTTGTTAGGAAGAAAGCGATTGGTGCAATTTTAAGGGTCTTTGAGAAGTACCCTGATGCTGTTAGAGTTTGTTTTAAGCGGTTGGTTGAGAATTTAGAGAGTTCGGATCCAAAAATCTTGAATGCTGTGGTAGGAGTGTTTTGCCAGCTCTCTTTGAAAGATCCAAGGTCATATCTTCCCTTGGCACCTGAGTTTTATAGAATTTTGAATGATTCCAAGAATAACTGGGTTCTAATTAAGACACTGAAAATATTTGCCAAGTTGGCGCCCTTGGAACCTAGGTTGGCAAAAAAGATTGTTGAACCTATTTGTGAACATATAAGGAGAACTGAAGCGAAGTCCTTGATGTTTGAGTGTGTTAGGACTGTGGTCACTAGCTTGGGTGATTATGAGTCTGCAGTTAAACTGGCAGTTACAAAGATTAGGGAGTTTCTTGTTGATGAGGATCCAAATCTTAGATATCTTGGACTCCAAGCATTGTCAATTGTTGCACCACAGCACTTGTGGGCAGTATTGGAGAATAAGGAAGTTGTGATTAAGTCTTTGAGCGATGAAGATCCTAATGTTAAACTTGAGTCTTTGCGTTTGGTGATGGCTATGATGTCTGAGACTAATGTGGAAGAAATCACCCAGGTGTTGGTTAATTACGCATTAAAATCTGATGCAGAATTTTGCAATGAGATTTTGGATTTCATTTTATCAGCATGTTCTAGAAATGTGTATGAGATAATCATAGACTTTGATTGGTATGTATCCTTTCTTGGAGAAGTATCAAGGATTCCAAATTGCCAAAGGGGTGAAGAAATAGGGAATCAACTTATTGATATTGGTATGAGAGTTAAGGATGCTAGATTGGAGCTTGTTCGGGTTGGTCATGATCTCTTAATTGACCCTGCACTACTTGGTAATATGCACTTGCATAGGATATTATGTGCTGCTGCTTGGGTTGTTGGGGAGTATGTTGAGGTTGCAGGCAACCCTTTTGAACTTATGGATGCACTTTTACAACCTCGTACAAACCTCTTGCCACCATCAATAAGGGCAGTATATATTCATTCTGCTTTTAAAGTATTGATATTTTGCCTGGATTGTTTCCTTTTGCAAAATGAAGAGACTCCTGATGTGGCAACATCTGAAGGTTCAAACTATTACAAATTGGATGATAGTTTCTACCCACAAAAAACAGCTGGTTCTTCTGAAGATCTTGCTGTTGGAAGCAATGCGGACAGAATAGATGCTTGTGGTCAGAAATCTACAGATATTTCTATGGAGAAGAAAATTTTCACATATGAATCTATTTGTAATATGTTAAATCTAATCGAATCGGTTTTTGGCCCTCTAACAGAAAATCAGGATATTGAAGTACTGGAGAGAGCGCGAAATGTACTTTCTTTTGTTCAGTTGATTAAAGCCAAAATTCCTGATAGTTCAGTCCACAATGTGGACAAGAACGATGCTCTAGTTTCAGCGATGATCAAGTTGATGCTTGAGGCTTTTTCAAAGGAACTTGGTCCTGTCTCAAGAAGTGCACAGAATAAAGTCTCTGTTCCAGATGGATTAGTTCTTAAAGAGAATCTTGATGACTtagaaacaatatataatagGGATATTGAGTTACTTTCATCTAGTTCATTCTGCATAGGAGGGCCTCATTTTGGCCATACTTCTGATGCTTCTTCATCTAGTCTTTTGAGTAAAGAAGAGTTAGGGAAATCAAATGAATCTATGTCTCTACTTGAACACAGGAAGCGGCATGGATTATATTACCTTTCTTCAGAGAAGAATGAAATTGTTTCAGATGATTATCCTCCTGCCGATGACCCAAAGATAGAAAATTATGTAAATGATGAAGCTGATAGTCTAGCCAAGCTGACAGCACAATCACTTGTTTTGAAGAAAAGGCCAAGCCAGATGAAGACTAGGCCCGTTGTTGTGAAATTGGATGAAGGAGATGTGGCACCAGCTGCAGTAAAGAGGCCAGAGCCAAAGGATGAATCTCTTTCAGGTGCTATAAGAGATGTTCTCTTAGGAAGTGGAACAGGACCAAGTTGGTCTCAAAGTAATCCTTCTGACAAGTcatcagacaagaagaaagggaaaaagaaactAAGCACAAATCTTCCATCTGAAATGAAAGAAGGCTTGGGTGATGGTGATGGAGATAAGCCTGACCTTGAAAACCCAAATGCGAGGAGTAAACACAGAAGtcataaaaaagagagaagacatAAAAGTcaggggaaaattgttgaagaaggtgaagaacatgaacaaaaggaaaagaaaaagagtagtCGTCGCCATGGCTCCAAATCCAACAACCTACCCTTAACCCATCTTCTTCGTTTTCTTTTCTTCGTGATTGGTTTGTCCCTAGGAGTCACCATTAGTGTATACTTCAAgaccttcctcttctccttcagcCTACAAGGAGGAGGACTAGTGTTTCATAATTCATCATCACCAAGGCCTCCTCCGTCGTTGCCACCGCCACCGGCTTGGATTCAACCGAGTCCGAATGGATCGGCGGCGTCATACAGCTTCGTGGCCTCCTATGACGACCCCAGAAAAGTAGGACGTGGCAGATACAACCCCAAGATGGGACCCACCATCACCCTCTCGGATTGGCGCAAGGGCTCCCAATGGTTCGAGCTCAATCGTGAGATGGCCATACAGGTTGTGTCGGACACCAAATACTACGTCGTTTTCACATCATTGGAGTAA 3198 0.3959 MAGSSIMDNLFQQTLEDLIKGFRLKLIGESALVSKSMEDIHREIKSTDPHTKSTALQKLSYLSGIYGVDMSWAAFHVIEVMSSSRFAHKRVGYFAASQSFHEGTSVLLLITNQLRKDLSSTNEFEVSLALECLSTIGTVDLARDLTPDVFTLLSTSKAFVRKKAIGAILRVFEKYPDAVRVCFKRLVENLESSDPKILNAVVGVFCQLSLKDPRSYLPLAPEFYRILNDSKNNWVLIKTLKIFAKLAPLEPRLAKKIVEPICEHIRRTEAKSLMFECVRTVVTSLGDYESAVKLAVTKIREFLVDEDPNLRYLGLQALSIVAPQHLWAVLENKEVVIKSLSDEDPNVKLESLRLVMAMMSETNVEEITQVLVNYALKSDAEFCNEILDFILSACSRNVYEIIIDFDWYVSFLGEVSRIPNCQRGEEIGNQLIDIGMRVKDARLELVRVGHDLLIDPALLGNMHLHRILCAAAWVVGEYVEVAGNPFELMDALLQPRTNLLPPSIRAVYIHSAFKVLIFCLDCFLLQNEETPDVATSEGSNYYKLDDSFYPQKTAGSSEDLAVGSNADRIDACGQKSTDISMEKKIFTYESICNMLNLIESVFGPLTENQDIEVLERARNVLSFVQLIKAKIPDSSVHNVDKNDALVSAMIKLMLEAFSKELGPVSRSAQNKVSVPDGLVLKENLDDLETIYNRDIELLSSSSFCIGGPHFGHTSDASSSSLLSKEELGKSNESMSLLEHRKRHGLYYLSSEKNEIVSDDYPPADDPKIENYVNDEADSLAKLTAQSLVLKKRPSQMKTRPVVVKLDEGDVAPAAVKRPEPKDESLSGAIRDVLLGSGTGPSWSQSNPSDKSSDKKKGKKKLSTNLPSEMKEGLGDGDGDKPDLENPNARSKHRSHKKERRHKSQGKIVEEGEEHEQKEKKKSSRRHGSKSNNLPLTHLLRFLFFVIGLSLGVTISVYFKTFLFSFSLQGGGLVFHNSSSPRPPPSLPPPPAWIQPSPNGSAASYSFVASYDDPRKVGRGRYNPKMGPTITLSDWRKGSQWFELNREMAIQVVSDTKYYVVFTSLE 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2173 1065 Pfam Core-2/I-Branching enzyme 1002 1062 IPR003406 GO:0016020|GO:0016757
Sto8g2173 1065 Pfam Adaptin N terminal region 35 509 IPR002553 GO:0006886|GO:0016192|GO:0030117
Sto8g2173 1065 MobiDBLite consensus disorder prediction 832 931 - -
Sto8g2173 1065 SUPERFAMILY ARM repeat 33 697 IPR016024 -
Sto8g2173 1065 MobiDBLite consensus disorder prediction 903 920 - -
Sto8g2173 1065 Gene3D - 4 635 IPR011989 -
Sto8g2173 1065 PANTHER DELTA ADAPTIN-RELATED 3 931 IPR017105 GO:0015031|GO:0030123
Sto8g2173 1065 MobiDBLite consensus disorder prediction 872 891 - -
Sto8g2173 1065 MobiDBLite consensus disorder prediction 849 865 - -
Sto8g2173 1065 PIRSF AP3_delta 1 937 IPR017105 GO:0015031|GO:0030123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2173 Sto-Chr8 14303280 14314941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2173 K12396 - gmx:100815221 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2173 8 14303280 14314941 Sto8g2173 8 14303280 14314941 ECH