Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2161 ATGAGCAGAAAGATAAGTTTGCTTCTCAGAGTCGAAGATGCAGCAATTGACTTCTTCAACTATATCCTCCGGGAGAAGCCCCAAATTCTGCTCTTCCTTCCTCTGATTTTGATTGCTTGGGCTATTGAGAAATGGGCATTCTCTCTCTCCAATTGGGTTCCGCTTGCACTCGCTGTATGGGTAACTATTCAGTATGGGAGTTACCAACACAGAATACAGGTGGAGGACTTAAATAAGAAATGGAAGCGAATCATACTGAACACCTCGCCTGAGACACCATTGGAGCACTGTGAGTGGCTGAATAAACTGTTGACGGAAATTTGGTCCAACTATTTTAATCCAAAGCTTTCAATAAGATTATCAGATATAGTGGAGAAACGTTTAAAGCTTCGAAAACCCAGACTTATAGAAAAACTTGAACTGCAGGAGTTTTCACTTGGATCATGCCCTCCTAGCTTGGGTCTTCAAGGAATGAGATGGTCAACTTCGGGTGATCAGAGAGTCCTTCGACTTGGATTTGATTGGGACACAAAtgaaatgagtattttgatgttTGCTAAGCTTGCCAGGCCATTGATTGGAACTGCCCGGATTGTGGTTAACAGTCTTCATATCAAGGGTGAGCTTCTTGTGACACCAATTCTAGACGGTAAAGCACTTTTGTATTCATTTCTATCGACTCCTGAGGTGAGAATCGGAGTTGCCTTTGGAAGTGGTGGAAGCCAATCTCTACCTGCTACTGAGTTGCCTGGTGTTTCGTCTTGGCTGGTTAAACTTTTTAGTGACACCTTGGTTAAGACAATGGTGGAACCTCGCCGTCGTTGTTTCTCCTTGCCTGCAGTGGACTTAAGAAAAAGGGCTGTTGGAGGCATTATATATGTTAGAGTGATTTCAGCAAATAAGCTTTCTAGGAGTTGCTTCAAGGGAAGCCCAAGTAAGAGGCATCAAAATGGTACAGCCAATGACTGTTTAGAAGACAATTTTGATGATAAGGACCTACATACATTTGTGGAGATAGAACTCGAGGAATTAACCAGGAAAACAGATGTGAGACTGGGTTCAACTCCTCGTTGGGATGCAACATATAATATGGTTTTACATGATAATACAGGAACTCTTCGTTTCAATCTCTACGAGTGTCCTCCTGGCAATATGAAGTATGACTATCTAGCAAGTTGTGAAGTCAAGATGAGGCATGTTGAAGATGATTCAACAATAATGTGGGCAATAGGACCTGATTCTGGTGTCATAGCAAAGCATGCGCAGTTTTGTGGAGATGAAGTTGAAATGGTTGTCCCATTTGAGGGGCCTAATTCAGGAGAGTTGAAGGTGAGAATTGTGGTAAAAGAGTGGCAATACTCTGATGGTTCACATAGCTTGACCAAATTTAGTGTTAGCCCTCAGCATTCACTTAATGGTTCATCAAATCTTTTGTCAAGAACTGGAAGGAAACTTAACATAACTGTTGTCGAAGGAAAGAACTTTGCTGCAAAAGACAAGTCTGGAAAATTTGACCCATACGTAAAATTGCAATATGGGAAGGTTGTCCATAGAACAAGAACTGCTCATACTTCAAATCCTGTGTGGAATCATTGCTTTGAGTTCGATGAGATTGGTGGTGGTGAATACCTGAAAATAAAATGCTTTAGTGAAGAAACTTTTGGAGATGAAAACATTGGTAGCGCTTCTGTAAATTTGGAAGGACTGGCGGAAGGGTCGATCAGGGATGTGTGGATTCCTCTTGAAAGAGTTAGTTCTGGAGAATTAAGACTTCAAATAGAAGCAGTTAGGGTGGATGACCAAGAAGGATCAAGGGGTTCTTCTTTAGGCTCAGGCAATGGTTGGATTGAGCTTGTTCTGATTGAAGCAAGAGATCTTATTGCGGCTGATCTCAGAGGGACAAGTGATCCATATGTGAGGGTACACTATGGAAACATGAAGAAAAGGACAAAGGTTATACACAGAACTCTTAAACCTCAGTGGAACCAGACCTTAGAGTTCCTTGATGATGGGAGTCCCCTATTACTGTATGTTAAGGACCATAATGCTTTATTACCGACATCAAGCATAGGCGAATGCGTCGTAGAATACCAAAGGTTGCCTCCAAACGAGATGGCTGACAAGTGGATACCTCTCCAGGGCGTCAAAAAGGGCGAGATCCACATCCAAATTACCAGAAAAGTTCCACAGATGCAAAAGAGACAAAGTCTACACTCTGAACCTTCATTGAGTCAATTACACCAAATTCCTACCCAGATCAAGGAGATGATGGTTAAGGTTCGATCTTTCATAGAGGATGAGAATCTTGAAGGACTGTCTACAACTTTGAGTGAGCTTGAAGCTCTGGAGGATTCCCAGGAAGCATATATAAGCCAGTTGGAGACTGAGCAAATGCTTCTTCTCAGCAAAGTAAAAGAACTAGGCGAGGAGATCATTAATTCTTCTCCTTCCTTGAGCAGAAGATCCTCTGGAAGTTGA 2478 0.4189 MSRKISLLLRVEDAAIDFFNYILREKPQILLFLPLILIAWAIEKWAFSLSNWVPLALAVWVTIQYGSYQHRIQVEDLNKKWKRIILNTSPETPLEHCEWLNKLLTEIWSNYFNPKLSIRLSDIVEKRLKLRKPRLIEKLELQEFSLGSCPPSLGLQGMRWSTSGDQRVLRLGFDWDTNEMSILMFAKLARPLIGTARIVVNSLHIKGELLVTPILDGKALLYSFLSTPEVRIGVAFGSGGSQSLPATELPGVSSWLVKLFSDTLVKTMVEPRRRCFSLPAVDLRKRAVGGIIYVRVISANKLSRSCFKGSPSKRHQNGTANDCLEDNFDDKDLHTFVEIELEELTRKTDVRLGSTPRWDATYNMVLHDNTGTLRFNLYECPPGNMKYDYLASCEVKMRHVEDDSTIMWAIGPDSGVIAKHAQFCGDEVEMVVPFEGPNSGELKVRIVVKEWQYSDGSHSLTKFSVSPQHSLNGSSNLLSRTGRKLNITVVEGKNFAAKDKSGKFDPYVKLQYGKVVHRTRTAHTSNPVWNHCFEFDEIGGGEYLKIKCFSEETFGDENIGSASVNLEGLAEGSIRDVWIPLERVSSGELRLQIEAVRVDDQEGSRGSSLGSGNGWIELVLIEARDLIAADLRGTSDPYVRVHYGNMKKRTKVIHRTLKPQWNQTLEFLDDGSPLLLYVKDHNALLPTSSIGECVVEYQRLPPNEMADKWIPLQGVKKGEIHIQITRKVPQMQKRQSLHSEPSLSQLHQIPTQIKEMMVKVRSFIEDENLEGLSTTLSELEALEDSQEAYISQLETEQMLLLSKVKELGEEIINSSPSLSRRSSGS 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2161 825 PANTHER PLANT SYNAPTOTAGMIN 3 820 - -
Sto8g2161 825 Gene3D C2 domain 289 424 IPR035892 -
Sto8g2161 825 CDD C2 485 581 - -
Sto8g2161 825 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 611 725 IPR035892 -
Sto8g2161 825 Coils Coil 776 796 - -
Sto8g2161 825 Pfam C2 domain 484 581 IPR000008 -
Sto8g2161 825 Pfam C2 domain 291 401 IPR000008 -
Sto8g2161 825 Pfam C2 domain 616 712 IPR000008 -
Sto8g2161 825 PANTHER OS01G0128800 PROTEIN 3 820 - -
Sto8g2161 825 ProSiteProfiles C2 domain profile. 465 579 IPR000008 -
Sto8g2161 825 ProSiteProfiles C2 domain profile. 585 710 IPR000008 -
Sto8g2161 825 SMART C2_3c 484 578 IPR000008 -
Sto8g2161 825 SMART C2_3c 615 709 IPR000008 -
Sto8g2161 825 SMART C2_3c 291 409 IPR000008 -
Sto8g2161 825 CDD C2 616 712 - -
Sto8g2161 825 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 483 595 IPR035892 -
Sto8g2161 825 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 284 405 IPR035892 -
Sto8g2161 825 Gene3D C2 domain 602 727 IPR035892 -
Sto8g2161 825 Gene3D C2 domain 466 599 IPR035892 -
Sto8g2161 825 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 93 279 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2161 Sto-Chr8 14180234 14186904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2161 485 749 Lipid Metabolism Gene Families AT3G57880 25.159 3.83e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2161 - - gmx:100807475 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2161 8 14180234 14186904 Sto8g2161 8 14180234 14186904 ECH