Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2135 ATGGCACCAATCTTCGAGTATTTTGTTGTGTGCGGGATCGGTCCCGAGATTCGAACCCTTGACGGAAATAAAGGGTTCCATGGTATTGGTTATATGTATCTTCCTTCTCTTCTAGATCAGTACCCTCCGCCCAATCACACTCTCTACCCTCCTCCACCTCCTCAGCTTCCCACATGTGTTCTACCAGCTGGTGTGGAGTTCTACTCTTCGGGATTTGATGCCAATGATCCCTCCACATTTCCGCGGAGCTATCCGATTGTTTTAACCGAGGGTGATGGTTCAAAAATATATGTTAGCTGCATATCTTTCCGGGATCCAGTTTGTGAGGATATAGCAGAGGCTTACCGGATACCAGCAAATTCTTTCGCTGATAAATGCATTTGTCTAGTTTCACGCTCGCCAAGTTTCCGTGTACTTAGGAGTGCACTAGAGGAGTTATTTTCACTCTGCTTTTCTCCCAATGGAAGCAGCAAGCCATTATGGGATGTTATAGCACATGCTGTGTCCAATGTACCTTTACCAACTCCTGGAAGAGAGCGAGTTCTGTTTGCTATCGAAAATTGTCTACTTTCTGTGGAGGCTCCACCAAATGATGGCCTCCCCCATGTTGATATATCATTTCAGCCCCTAGTGCAGTGCTTGGATGTTGACAATTTAATGAGACTTTTTACAGCAGTGTTGCTTGAGAGGAGGATTTTGATTCGAGCAAACAAGTATTCACTTCTAACTCTTGCATCAGAGGCCATTTGTCACTTGATTTATCCATTCCGATGGCAGCACGTATACATTCCATTGCTATTTTTCAGTGGAGTAGACTATATTGATGCTCCCACACCATATATGATGGGCCTCCACTCAGGTGTTGATACCTCTTCTCTGGCAATGGATGGTGTTGTTATTGTGGACCTTGAGTATAATCGTATCACTACAACGGAGGAAATTCCACCTATTCCAGAGCCAGAATTTACCTTATTACGTGGTGAAATGTTGAAGTTATTATATCCCAATGTAGTTGGAATTGATGAGGTGAAGGCAGGAATATGTGGTGTATCTGAGCACTACCCTAAATCTGGAACCAAGCAATGGGGAGAGGATCATGACCTTCACCTAAGGTTAATATTCTTGAAGTTCTTTGCAACACTTCTAAGCGGTTATCGCAATTTTGTAGAAAATAGTGCAACTCATGTCTTCAATACTCAAGCTTTTCTGAAAAAGCGCTCTCGATCTACTAACCAGCCCCCAGAGCCCATGATAGTTCAATTCCTAGATTCTCTTGGATTCTTGGATTATTTGGAAAGAGGTATAGGTTCTGATGAACACAGCAATAACATGCTTGATAAGCTACAAGATGCAATTGGAAGGGGCCAAAATCCTTTGTCAATTCTTCCATCATCTTCACTAGAGCCTGAGATTTTAACAATATCAGATTCCGATGTTGGAATATCAGGATCGGGTGCCAAATATACTTATGATAGGTTTCCGTCAAACATCAGAACCGAAGAGcaagaagaaaagaggaagcAGATTCTTGCAGCAGCAAGTAGTGCCTTTGAGTACTCGGGAAGGCATACTCCAAGtttactttctgtATTTTTCAGTAAGGACCCTATAGCAGATGGTCTTAGTCCCCTGGAGAGAGCTGCAGAAAGGGAGCGCATGGTGTTGGATATTAAGGTTAAGCTGCAGGGTTTGTGGTTACGGCTTCTTAAACTGGGACCAACAGACGATCCTCTTTCATCCTTTGAATATGGAACAATACTTGCGTTGATTGAATCTGATGCAGAGGGGATTGGTGGTAGTGGTTTTGTTGAATGTATAAGGGAGCACATACATTCAGGTTGGCATTGTCAGCTCACTGAAGAACAATTTATTGCAGTGAAAGAATTGCTCAAAACCGCTATCAATCGGGCAACTTCCCGGAATGACTTGTTGACCATTAGAGATGCCCTTGAAGTTTCTTCTGATATGTACAAGAAAGACATAAATAATGTGGCGGACTATGTCCAACGCCATCTAATTTCTCTATCTATTTGGGAGGAGTTACGGTTTTGGGAAGGGTATTTTGACTATTTAATGGAGCAATCTTCAAACAAGTCAGCCAACTATTCATCTTTGGTAACAGCACAGCTTGTTGTAGTTTCATCACACAtgGTTGGACTAGGACTTCCTGATAATGATACTTGGTTCATGATTGAAACAATAGCTGAGAGAAACAACGTTGGGTCCAAGCAGTTTATAAAACTCAGAGGATTCTTGTCACATATCCAGCAACTACGTAATAATTATTGGGGGATCACCTCTATGAAGTCACAGTCTTTGTCATCCCTTGCATTACCATCACCACGTCCAAAAGATGCCAAAGATGAGCATCAGCAACCTGCTGAGGCAACTGGAAGAAGCTGGGTGCAAAGCATGTTCAGCCGTGATACAACATCTAGATCCAGCTCATTCAGCCGTGTCCGTAAATGGACTTCTGATGGTGGTACGTTTTctTCAAGTGAGAATGAGACTCCTCGCAAACAAGATTTATCAACTGCTGGGCAGAAGAAGCTTCAAACCAATGTTCGCGTACTTAGGGGTCATAATGGTGCTGTAACTGCACTTCATTGTGTTACAAAGAGagaggtttgggatttggtggGTGACCGTGAAGATGCTGGTTTCTTTATCAGTGGAAGCACAGACTGTTCAGTTAAGATCTGGGATCCTAGTCTTCGAGGTTCAGAACTCAGGGCAACTTTAAAAGGACACAAAAGAACTGTTCGTGCTATTAGTTCAGATAGAGGAAAGGTTGTTTCAGGATCTGATGATCAGTCTGTTTTAGTGTGGGATAAGCAAACAACTCAGCTTTTAGAAGAGCTTAAAGGCCATGACGCACAGGTAAGCCGTGTGCGTATGCTCTCAGGAGAGCGTGTTCTAACTTCATCACATGATGGCACTGTGAAGATGTGGGACGTTAGAACTGATACCTGTGTAGCAACAGTTGGTCGTTGCTCTAGTGCAGTCCTATGCATGGAATATGATGACAATGCGGGAGTCTTGGCTGCTGCTGGAAGAGATGCGGTTGTTAACATATGGGACATCCGTGCTGGTAAGCAGATGCATAAGCTTTTAGGACATACACAATGGATTCGGTCCATAAGAATGGTAGGTGACACTTTAATTACTGGTAGTGATGATTGGACTGCAAGAATATGGTCTGTTTCTCGAGGAGCATGTGATGCTGTTCTAGCATGCCATGCTGGGCCAATATTATGTGTGGAGTATTCTTCTCAAGATAAAGGAATTATAACAGGATCAACCGATGGCCTTATACGATTTTGGGAGAATGATGAGGGAGGTATAAAGTGTGTAAAAAATGTAACAATTCACAATGCCACCGTATTATCTATCAATGCTGGGGAACACTGGTTAGGAATTGGAGCTGCTGATAATTCCATGTCTCTCTTTCATCGGCCCCAAGAAAGACTTGGTGGCTTTTCCAGCACTGGGTCCAAGATGGGTGGTTGGCAGCTTTACAGAACACCACAAAAAACAGTTGCCATGGTAAGATGTATAAGTTCAGACCTGGAGAGGAAAAGGATATGCAGTGGTGGTCGTAATGGACTTTTAAGGCTGTGGGATGCCACCATCAACATTTGA 3642 0.4253 MAPIFEYFVVCGIGPEIRTLDGNKGFHGIGYMYLPSLLDQYPPPNHTLYPPPPPQLPTCVLPAGVEFYSSGFDANDPSTFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIPANSFADKCICLVSRSPSFRVLRSALEELFSLCFSPNGSSKPLWDVIAHAVSNVPLPTPGRERVLFAIENCLLSVEAPPNDGLPHVDISFQPLVQCLDVDNLMRLFTAVLLERRILIRANKYSLLTLASEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHSGVDTSSLAMDGVVIVDLEYNRITTTEEIPPIPEPEFTLLRGEMLKLLYPNVVGIDEVKAGICGVSEHYPKSGTKQWGEDHDLHLRLIFLKFFATLLSGYRNFVENSATHVFNTQAFLKKRSRSTNQPPEPMIVQFLDSLGFLDYLERGIGSDEHSNNMLDKLQDAIGRGQNPLSILPSSSLEPEILTISDSDVGISGSGAKYTYDRFPSNIRTEEQEEKRKQILAAASSAFEYSGRHTPSLLSVFFSKDPIADGLSPLERAAERERMVLDIKVKLQGLWLRLLKLGPTDDPLSSFEYGTILALIESDAEGIGGSGFVECIREHIHSGWHCQLTEEQFIAVKELLKTAINRATSRNDLLTIRDALEVSSDMYKKDINNVADYVQRHLISLSIWEELRFWEGYFDYLMEQSSNKSANYSSLVTAQLVVVSSHMVGLGLPDNDTWFMIETIAERNNVGSKQFIKLRGFLSHIQQLRNNYWGITSMKSQSLSSLALPSPRPKDAKDEHQQPAEATGRSWVQSMFSRDTTSRSSSFSRVRKWTSDGGTFSSSENETPRKQDLSTAGQKKLQTNVRVLRGHNGAVTALHCVTKREVWDLVGDREDAGFFISGSTDCSVKIWDPSLRGSELRATLKGHKRTVRAISSDRGKVVSGSDDQSVLVWDKQTTQLLEELKGHDAQVSRVRMLSGERVLTSSHDGTVKMWDVRTDTCVATVGRCSSAVLCMEYDDNAGVLAAAGRDAVVNIWDIRAGKQMHKLLGHTQWIRSIRMVGDTLITGSDDWTARIWSVSRGACDAVLACHAGPILCVEYSSQDKGIITGSTDGLIRFWENDEGGIKCVKNVTIHNATVLSINAGEHWLGIGAADNSMSLFHRPQERLGGFSSTGSKMGGWQLYRTPQKTVAMVRCISSDLERKRICSGGRNGLLRLWDATINI 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2135 1213 MobiDBLite consensus disorder prediction 774 848 - -
Sto8g2135 1213 SMART uDENN_cls 1 104 IPR005113 -
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 914 944 - -
Sto8g2135 1213 ProSiteProfiles Tripartite DENN domain profile. 19 441 IPR037516 -
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats profile. 954 994 IPR001680 GO:0005515
Sto8g2135 1213 Pfam uDENN domain 35 103 IPR005113 -
Sto8g2135 1213 ProSitePatterns Trp-Asp (WD) repeats signature. 972 986 IPR019775 -
Sto8g2135 1213 PANTHER DENN DOMAIN-CONTAINING PROTEIN 3 3 1213 - -
Sto8g2135 1213 ProSitePatterns Trp-Asp (WD) repeats signature. 1195 1209 IPR019775 -
Sto8g2135 1213 PANTHER C-MYC PROMOTER BINDING PROTEIN 3 1213 - -
Sto8g2135 1213 SMART WD40_4 1169 1208 IPR001680 GO:0005515
Sto8g2135 1213 SMART WD40_4 988 1027 IPR001680 GO:0005515
Sto8g2135 1213 SMART WD40_4 1114 1151 IPR001680 GO:0005515
Sto8g2135 1213 SMART WD40_4 1030 1067 IPR001680 GO:0005515
Sto8g2135 1213 SMART WD40_4 947 985 IPR001680 GO:0005515
Sto8g2135 1213 SMART WD40_4 907 944 IPR001680 GO:0005515
Sto8g2135 1213 SMART WD40_4 851 902 IPR001680 GO:0005515
Sto8g2135 1213 SMART WD40_4 1070 1109 IPR001680 GO:0005515
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats profile. 1077 1109 IPR001680 GO:0005515
Sto8g2135 1213 PRINTS G protein beta WD-40 repeat signature 931 945 IPR020472 -
Sto8g2135 1213 PRINTS G protein beta WD-40 repeat signature 972 986 IPR020472 -
Sto8g2135 1213 PRINTS G protein beta WD-40 repeat signature 1014 1028 IPR020472 -
Sto8g2135 1213 SMART DENN_cls 122 306 IPR001194 -
Sto8g2135 1213 MobiDBLite consensus disorder prediction 796 848 - -
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1077 1109 - -
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats profile. 884 902 IPR001680 GO:0005515
Sto8g2135 1213 SMART dDENN_cls 366 434 IPR005112 -
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats profile. 999 1036 IPR001680 GO:0005515
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats profile. 1037 1076 IPR001680 GO:0005515
Sto8g2135 1213 Pfam DENN (AEX-3) domain 124 304 IPR001194 -
Sto8g2135 1213 Coils Coil 1211 1213 - -
Sto8g2135 1213 Pfam WD domain, G-beta repeat 949 985 IPR001680 GO:0005515
Sto8g2135 1213 Pfam WD domain, G-beta repeat 1073 1108 IPR001680 GO:0005515
Sto8g2135 1213 Pfam WD domain, G-beta repeat 1031 1067 IPR001680 GO:0005515
Sto8g2135 1213 Pfam WD domain, G-beta repeat 912 944 IPR001680 GO:0005515
Sto8g2135 1213 Pfam WD domain, G-beta repeat 853 902 IPR001680 GO:0005515
Sto8g2135 1213 CDD WD40 854 1150 - -
Sto8g2135 1213 SUPERFAMILY Nucleoporin domain 1079 1209 - -
Sto8g2135 1213 SUPERFAMILY WD40 repeat-like 855 1112 IPR036322 GO:0005515
Sto8g2135 1213 Gene3D - 202 387 IPR043153 -
Sto8g2135 1213 Gene3D - 1 177 - -
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 954 988 - -
Sto8g2135 1213 Gene3D - 797 1034 IPR015943 GO:0005515
Sto8g2135 1213 ProSiteProfiles Trp-Asp (WD) repeats profile. 914 953 IPR001680 GO:0005515
Sto8g2135 1213 Gene3D - 1035 1213 IPR015943 GO:0005515
Sto8g2135 1213 ProSitePatterns Trp-Asp (WD) repeats signature. 1014 1028 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2135 Sto-Chr8 13987531 14005723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2135 953 1128 Acyl Lipid Metabolism Gene Families AT3G18860 24.468 7.35e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2135 - - gmx:100818305 2121.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2135 8 13987531 14005723 Sto8g2135 8 13987531 14005723 ECH