Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2133 ATGGCTACCACAAGCCAAGCCTTCCTTTTCTTCACCATAGCCATTTCATTCTCTCTCACTTTTctcccttctccttcttcttcttctcgcaCCTTCACAACTGAAACCACTGTTCTCGATGTATCCTCCTCACTCCTGCAAGCCCAGAAAATCCTCACCTTCAACCCCGAAATGCTCCAAACTTCTCTCCTTCAAGATGAAGAAGAACAAAAGCTTCACACCaccccctcttcttcttcttcttcttcctcttcctttttCGTTCATTTACACCCAAGAGAATCTCTAATCAATGCCCAGCACGGAGAGTACAAGAACCTGGTCCTGACTCGGCTCCAACGTGACTCAGCCCGAGTCAACTCGTTGTTCACCAAGCTTGAGCTAGCCCTCAACCAAGTCAACAAATCGGATCTCCACCCGACCCAAACCGAGGTCCAACTCGAAGATTTATCAACACCGGTTTCCTCCGGTATCAGCCAGGGAAGCGGCGAGTACTTCACCAGAATCGGAGTCGGACAGCCGCCACAACCTTTCTACATGGTTCTCGACACCGGCAGCGACGTTAACTGGCTTCAGTGTCAGCCTTGCTCCGATTGTTACCAACAATCCGACCCGATCTTCAACCCGGTACGGTCTTCCTCCTACGGCCCACTCACCTGCGAGGCTCAACAGTGTCAGGCCCTCGACGTCTCTGCTTGCCGCAACGGCAAGTGTCTCTACCAGGTGTCGTACGGCGACGGCTCGTTCACCGTCGGGGAATACGTCACTGAAACGGTGTCGTTTGGCAACTCCGGATCCGTGAACCGCGTCGCAATGGGGTGTGGCCACGATAACGAGGGTTTATTCGTCGGTGCTGCCGGTTTACTTGGGCTCGGAGGCGGTTCGTTATCGCTCACGTCTCAGATCAAAGCGTCGTCGTTTTCATACTGCCTGGTGGATCGTGACTCGAGTAAATCGTCGACTCTCGAGTTCAACTCGGCCTCACCCGGTGACTCGGTGAACGCGGCGTTGTTGAGGAACAGTAAGGTGGACACATTCTACTACGTCGGACTCACCGGAATCAGCGTCGGCGGCCGGACGGTTTCTCTGCCGCCGTCGAGCTTCGCGCTGGACCAATCCGGAAGAGGCGGAATCATCGTGGACTGCGGCACGGCGGTGACTCGGCTGCAGACTCAGGCGTACAACGCGGTGCGCGACGAGTTCGTGAGGCAGACTCGGAACTTGCGATCCACGAGCGGGTTCGCTCTGTTCGACACGTGCTACGATTTCTCTTCGCTGAAGAGCGTGACGGTGCCGACGGTGTCGTTTCAGTTCAGCGGCGGGAAGTCTTGGGCGTTGCCGGCGAAGAACTACCTGATCCCGGTGGATTCCGCGGGAACTTTCTGCTTCGCGTTTGCTCCGTCGTCGCAGTCTTTGTCGATCATAGGGAATGTGCAGCAACAAGGGACACGTGTCAGCTTCGATCTAGCAAACTCGTACAGTGCTGCATGA 1491 0.5319 MATTSQAFLFFTIAISFSLTFLPSPSSSSRTFTTETTVLDVSSSLLQAQKILTFNPEMLQTSLLQDEEEQKLHTTPSSSSSSSSSFFVHLHPRESLINAQHGEYKNLVLTRLQRDSARVNSLFTKLELALNQVNKSDLHPTQTEVQLEDLSTPVSSGISQGSGEYFTRIGVGQPPQPFYMVLDTGSDVNWLQCQPCSDCYQQSDPIFNPVRSSSYGPLTCEAQQCQALDVSACRNGKCLYQVSYGDGSFTVGEYVTETVSFGNSGSVNRVAMGCGHDNEGLFVGAAGLLGLGGGSLSLTSQIKASSFSYCLVDRDSSKSSTLEFNSASPGDSVNAALLRNSKVDTFYYVGLTGISVGGRTVSLPPSSFALDQSGRGGIIVDCGTAVTRLQTQAYNAVRDEFVRQTRNLRSTSGFALFDTCYDFSSLKSVTVPTVSFQFSGGKSWALPAKNYLIPVDSAGTFCFAFAPSSQSLSIIGNVQQQGTRVSFDLANSYSAA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2133 496 Gene3D Acid Proteases 326 493 IPR021109 -
Sto8g2133 496 Pfam Xylanase inhibitor N-terminal 165 324 IPR032861 -
Sto8g2133 496 Pfam Xylanase inhibitor C-terminal 347 492 IPR032799 -
Sto8g2133 496 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 180 191 IPR001969 GO:0004190|GO:0006508
Sto8g2133 496 SUPERFAMILY Acid proteases 158 492 IPR021109 -
Sto8g2133 496 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 19 492 - -
Sto8g2133 496 PANTHER ASPARTYL PROTEASES 19 492 IPR001461 GO:0004190|GO:0006508
Sto8g2133 496 Gene3D Acid Proteases 139 324 IPR021109 -
Sto8g2133 496 ProSiteProfiles Peptidase family A1 domain profile. 165 496 IPR033121 -
Sto8g2133 496 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2133 Sto-Chr8 13962197 13964361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2133 142 488 Miscellaneous Gene Families AT1G77480 25.581 2.03e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2133 K22683 - gmx:100784849 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2133 8 13962197 13964361 Sto8g2133 8 13962197 13964361 ECH