Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1763 atgggTAAGGATTTGAGCGATGACCAAGTTTCTTCCATGAAACAAGCTTTTACCCTCTTCGATACTGACGGTAATGGTCGGATCGCTCCTTCTGAGCTTGGGATCCTCATGCGCTCTCTTGGCGGCAACCCAACCCAAGCTCAACTCAAGTCCATCATCGCCCAAGAGAACCTCACCGCCCCCTTCGACTTTCCCCGTTTTCTCGATCTCATGGCCAAGCACATGAAGTCCGAGCCCTTCGATCGCCAACTTCGCGACGCTTTCAAGGTTCTCGACAAGGACTCCACTGGCTCCGTTTCCGTCTCTGAGCTTCGACACATCCTCACCAACATTGGCGAGAAGCTCGAGCCTGCTGAGTTTGATGAGTGGATCAGGGAAGTGAATGTTAGTCCCGATGGGAAGATCGTTTACGAGGATTTCATTGCCACAATGGTGACTGAGTGA 444 0.5135 MGKDLSDDQVSSMKQAFTLFDTDGNGRIAPSELGILMRSLGGNPTQAQLKSIIAQENLTAPFDFPRFLDLMAKHMKSEPFDRQLRDAFKVLDKDSTGSVSVSELRHILTNIGEKLEPAEFDEWIREVNVSPDGKIVYEDFIATMVTE 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1763 147 Pfam EF-hand domain 13 41 IPR002048 GO:0005509
Sto8g1763 147 Gene3D - 82 146 - -
Sto8g1763 147 ProSiteProfiles EF-hand calcium-binding domain profile. 79 114 IPR002048 GO:0005509
Sto8g1763 147 PANTHER CALCIUM BINDING PROTEIN 1 145 - -
Sto8g1763 147 ProSitePatterns EF-hand calcium-binding domain. 21 33 IPR018247 -
Sto8g1763 147 CDD EFh 14 54 IPR002048 GO:0005509
Sto8g1763 147 Pfam EF-hand domain pair 82 143 IPR002048 GO:0005509
Sto8g1763 147 ProSiteProfiles EF-hand calcium-binding domain profile. 8 43 IPR002048 GO:0005509
Sto8g1763 147 PANTHER CALCIUM-BINDING PROTEIN CML13-RELATED 1 145 - -
Sto8g1763 147 Gene3D - 3 81 - -
Sto8g1763 147 CDD EFh 83 144 IPR002048 GO:0005509
Sto8g1763 147 ProSitePatterns EF-hand calcium-binding domain. 92 104 IPR018247 -
Sto8g1763 147 SUPERFAMILY EF-hand 5 144 IPR011992 -
Sto8g1763 147 SMART efh_1 83 111 IPR002048 GO:0005509
Sto8g1763 147 SMART efh_1 12 40 IPR002048 GO:0005509
Sto8g1763 147 SMART efh_1 119 147 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1763 Sto-Chr8 11225396 11225839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1763 1 147 EF-hand Containing Proteins AT1G12310 81.757 6.30e-87 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1763 K13448 - qsu:111989285 263.848