Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1726 ATGGAAAAGGAGCACAAGGAAACAATGTACAGGCGCGTGTTCGACCATTTCGACGAAGACGGTGACGGGAGGATATCGGCGTGGGAGCTACGGCAATGCGTGGAGGCGATGGGCGGCGCGATGACGGCGGAGGAGGCGGAGGCGGCGGTGGAGTGCTTGGACTCGGACGGAGACGGCCTTGTGGGGCTGGATGATTTCGTGAGGTTCGTGGAGGGAGGGGAGGAAGAAGAGAAGGTGAATCAGATGAAAGAGGCTTTCAAGATGTATGAGATGGATGGGTGTGGGTGTATCACTCCCAAGAGCCTCAAGAGAATGCTTGGGAGATTAGGAGAGTCCAGAAGCGTCGATGAATGCCAAGTCATGATCTCTAGattctttctttgttttgtgATTCTTTATTGA 402 0.5224 MEKEHKETMYRRVFDHFDEDGDGRISAWELRQCVEAMGGAMTAEEAEAAVECLDSDGDGLVGLDDFVRFVEGGEEEEKVNQMKEAFKMYEMDGCGCITPKSLKRMLGRLGESRSVDECQVMISRFFLCFVILY 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1726 133 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 6 126 - -
Sto8g1726 133 Gene3D - 1 70 - -
Sto8g1726 133 ProSitePatterns EF-hand calcium-binding domain. 54 66 IPR018247 -
Sto8g1726 133 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 6 126 - -
Sto8g1726 133 Gene3D - 71 122 - -
Sto8g1726 133 CDD EFh 9 70 IPR002048 GO:0005509
Sto8g1726 133 ProSitePatterns EF-hand calcium-binding domain. 18 30 IPR018247 -
Sto8g1726 133 Pfam EF-hand domain pair 9 70 IPR002048 GO:0005509
Sto8g1726 133 SUPERFAMILY EF-hand 7 125 IPR011992 -
Sto8g1726 133 SMART efh_1 9 37 IPR002048 GO:0005509
Sto8g1726 133 SMART efh_1 45 73 IPR002048 GO:0005509
Sto8g1726 133 SMART efh_1 81 109 IPR002048 GO:0005509
Sto8g1726 133 ProSiteProfiles EF-hand calcium-binding domain profile. 77 112 IPR002048 GO:0005509
Sto8g1726 133 ProSiteProfiles EF-hand calcium-binding domain profile. 5 40 IPR002048 GO:0005509
Sto8g1726 133 ProSiteProfiles EF-hand calcium-binding domain profile. 41 76 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1726 Sto-Chr8 11000747 11001243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1726 4 127 EF-hand Containing Proteins AT1G76640 48.031 2.00e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1726 K13448 - zju:107427847 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1726 8 11000747 11001243 Sto8g1726 8 11000747 11001243 ECH