Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1724 ATGGGAGTGAAACCCAAAATCGCACCTTCCATGCTATCATCCGACTTTGCCAATTTAGCTTCCGAAGCCCAACGCATGCTCAACTCTGGCGCCGATTGGCTCCACATGGACATTATGtttctcctttctttctcttttacatGCAGGCACTTTGTCCCCAATCTCACCATCGGTGCTCCAGTCATTGAAAGCTTGCGAAAGCACACAAAGGCATATCTGGACTGTCACCTGATGGTCACAAATCCTCTTGATTATGTTGAACCTTTGAGAAAGGCTGGTGCTTCTGGTTTTACATTTCACGTAGAGACGTCAAAAGATAACTGGCCAGAACTTGTCCAAAGAATAAAATCAGGGGGCATGAAGCCAGGTGTAGCATTAAAGCCTGGGACACCTATTGAAGAGGTTTATCCTCTGGTTGAAGCTGAaaatcctgtggagttggttctTGTGATGACTGTAGAACCTGGATTTGGAGGACAGAAATTTATGCCACAGATGATGGATAAGGTACAATTGCTAAGGCAGAAGTATCCCTCACTAGATATAGAGGTTGATGGTGGATTAGGGCCTTCAACCATTGACACAGCTGCATCTGCAGGAGCCAACTGTATTGTTGCTGGAAGTTCAGTGTTTGGAGCCCCTGAGCCTGCTCAAGTAATATCCTTGATGAGAAAGAGTGTTGAGAATGCTCAGCAAACAAGTTGA 705 0.4298 MGVKPKIAPSMLSSDFANLASEAQRMLNSGADWLHMDIMFLLSFSFTCRHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLRKAGASGFTFHVETSKDNWPELVQRIKSGGMKPGVALKPGTPIEEVYPLVEAENPVELVLVMTVEPGFGGQKFMPQMMDKVQLLRQKYPSLDIEVDGGLGPSTIDTAASAGANCIVAGSSVFGAPEPAQVISLMRKSVENAQQTS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1724 234 Hamap Ribulose-phosphate 3-epimerase [rpe]. 4 226 IPR026019 GO:0004750|GO:0006098
Sto8g1724 234 TIGRFAM rpe: ribulose-phosphate 3-epimerase 6 224 IPR026019 GO:0004750|GO:0006098
Sto8g1724 234 Pfam Ribulose-phosphate 3 epimerase family 6 211 IPR000056 GO:0005975|GO:0016857
Sto8g1724 234 PANTHER RIBULOSE-PHOSPHATE 3-EPIMERASE 1 233 - -
Sto8g1724 234 PIRSF RPE 1 234 IPR026019 GO:0004750|GO:0006098
Sto8g1724 234 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 148 170 IPR000056 GO:0005975|GO:0016857
Sto8g1724 234 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 1 233 IPR000056 GO:0005975|GO:0016857
Sto8g1724 234 CDD RPE 6 224 IPR000056 GO:0005975|GO:0016857
Sto8g1724 234 SUPERFAMILY Ribulose-phoshate binding barrel 4 229 IPR011060 -
Sto8g1724 234 Gene3D Aldolase class I 1 234 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1724 Sto-Chr8 10988433 10991558 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1724 K01783 - gmx:100500085 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1724 8 10988433 10991558 Sto8g1724 8 10988433 10991558 ECH