Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1715 ATGAGGGCTATGGATGCAGATAATCGCAGTACTGGTTCCTCTTCCTCAGGTAACGAACCTCAGGATGCAGATTataataataacattaataccAACAACACACCATCTCTAAGCGACGAGCTAGAGTCCCTAATCTTGGCCAGAGTCCCCAGACGCGAGTATAGGAAATTTTGCAGCGTTAACAAGAGATTCCTTAATCTCCTCAAGAGCGAAGAAATCTACAAAATCAGGAGAGAAATAGGATTCTCAGAATCCTCCGTCTTCATGTTCGCCAGTGGAGAAAACAATTGGTGGGGATTCGACCAGGATTTCCAATCCCGCAGGATGCTCCCTGTGATCCCCTCGGACTACAACTTCAAACACGGAGACAAGGAATCTTTCTGCGCCGGCACGCACCTGTTCGTCTCGGGACGGGAATTCGACGGACCCGCGGTTTGGAGATTCGAGCTCGCGTCGAACCAATGGTTCAAGGGCCCTCCCATGATCACCCCGCGCTGCCTCTTCGCTTCCGCCTCTTCCGGAAACTCCGCTTTCGTCGCGGGCGGTTTGGACACGTCAGCTTACAGCTGGCAGGTGGTGGACTCCGCGGAGAGGTACGACTCGGAGAGCAAGTGTTGGAAAGGGCTTCCTAGGATGCAACGAAAGAGGAAGTCTTGCTCCGGGTGCTTTATGGATGGGAGGTTCTATGTGGTTGGGGGGCAAGATGAGCGGCAAAACGACCTCGTTTGTGGGGAGTTTTTTGATGAAGAGACGCAGAGTTGGAACTTGGTTCCTGATATGTTGAAGGATATTCCTGTGTGTGTGTCGCGATCTCCGCCTCTTGTTGCTGTGGCTAATAACGAGCTTTATACATTGGATGCTTCTTGTAACGAGCTGAAGGTGTATCTCAAGGGGACTAACTCGTGGAAGAAGTTAGGAAATGTGCCTGTGATGGCTAATGCTCAAGGAGGGTGGGGTGTGGCGTTTAAGTCTTTGGGTAGTGAGCTGCTTGTGATTGGTGCGACTTCTGGGTCTTATTCAGGGCGTGGGTTCACTATATATACGTGCTGCCCTGAACCCTGCGTTGAGGAGTTGCAATGGAGGCGGATTGAATGTGGGAGTACCAAGCTTAGTGCCTTCATTCACAATTGTGCTGTCATGGAAGGAAGCTTGGCTTGTTCGTGTCGTACTCGTACGTGTCGTGTGTCTTTTCTTCGGCTTCTTCTAATGCTACTGTTTGCTTTCATGTTCCAGCTACCAAATCCAATTTTCTGA 1254 0.4992 MRAMDADNRSTGSSSSGNEPQDADYNNNINTNNTPSLSDELESLILARVPRREYRKFCSVNKRFLNLLKSEEIYKIRREIGFSESSVFMFASGENNWWGFDQDFQSRRMLPVIPSDYNFKHGDKESFCAGTHLFVSGREFDGPAVWRFELASNQWFKGPPMITPRCLFASASSGNSAFVAGGLDTSAYSWQVVDSAERYDSESKCWKGLPRMQRKRKSCSGCFMDGRFYVVGGQDERQNDLVCGEFFDEETQSWNLVPDMLKDIPVCVSRSPPLVAVANNELYTLDASCNELKVYLKGTNSWKKLGNVPVMANAQGGWGVAFKSLGSELLVIGATSGSYSGRGFTIYTCCPEPCVEELQWRRIECGSTKLSAFIHNCAVMEGSLACSCRTRTCRVSFLRLLLMLLFAFMFQLPNPIF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1715 417 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 24 381 - -
Sto8g1715 417 SMART kelc_smart 227 280 IPR006652 GO:0005515
Sto8g1715 417 SMART kelc_smart 132 175 IPR006652 GO:0005515
Sto8g1715 417 SMART kelc_smart 176 226 IPR006652 GO:0005515
Sto8g1715 417 Gene3D - 70 374 IPR015915 GO:0005515
Sto8g1715 417 PANTHER KELCH REPEAT F-BOX PROTEIN 24 381 - -
Sto8g1715 417 MobiDBLite consensus disorder prediction 7 34 - -
Sto8g1715 417 Pfam Kelch motif 164 213 IPR006652 GO:0005515
Sto8g1715 417 Pfam Kelch motif 216 260 IPR006652 GO:0005515
Sto8g1715 417 SUPERFAMILY F-box domain 27 128 IPR036047 GO:0005515
Sto8g1715 417 SUPERFAMILY Kelch motif 94 350 IPR015915 GO:0005515
Sto8g1715 417 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1715 Sto-Chr8 10942618 10943983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1715 37 257 Miscellaneous Gene Families AT4G33900 26.872 1.16e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1715 - - ccaj:109807283 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1715 8 10942618 10943983 Sto8g1715 8 10942618 10943983 ECH