Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1644 ATGAACTATTTTCCAGACGAGGTACTAGAGCACGTGTTCGACTTCGTGACGTCGCACCGGGACCGGAACGCGGTGTCTCTGGTGTGCAAAACGTGGTACAGAGTAGAGAAATGTAGCCGGGAGAAGGTGTTCATAGGGAACTGTTACTCGATCAGCCCAGAGAGGTTGATCCAGAGGTTTCCAGGGCTGAAATCCCTTACTCTCAAGGGAAAGCCTCATTTTGCAGACTTCAATCTGGTCCCTCATGATTGGGGAGGCTTCCTTTATCCATGGATTGAAGCTCTGGCGAAGAACAGGGTCGGGTTGGAGGAGCTTAGGTTGAAGAGGATGGTGGTTTCGGATGAGAGCCTGGAGCTACTTTCGCGTTCCTTCGTGAATTTCAAGTCTCTTGTTCTTGTTAGCTGTGAAGGGTTCACCACCGATGGCCTTGCCGCTATAGCTGCGAATTGCAGGcttttgttctttaaaaaacGTAGGTTTCTTAGAGAGCTGGACCTGCAGGAGAATGAAATTGAGGATCACAAAGGCCAGTGGCTAAGCTGCTTTCCTGATACATGTACATCACTTGTCTCTCTCAATTTTGCTTGTCTTAACGGAGAGATCAATGTGGGAGCTCTTGAAAGACTTGTGGCCAGATCTCCTAATCTTAAGAGTTTAAAGTTAAACCCTGCTGTGCCCCTTGACACACTCCAACGGATATTGATGCGAGCGCCGCAGCTTGTGGACTTAGGTACGGGGTCTTTTGTTCATGATCCAGATTCTGAGACCTATGCCAAGCTGAAGAATACCATTCTAAAGTGCAAATCAATAACCAGTTTGTCGGGGTTTCTGGAGGTTGCTCCTCGCTGCTTACCAGCTATATATCCTATTTGCTCAAACGTGACATCCTTGAACTTGAGCTATGCAGCAGGGCTTGAGGGCAATGATCTGATAAAATTAATTCGCCACTGCAGGAAACTAGAGCGCTTATGGATACTGGATTGCATTGGAGACAAAGGACTAGGTGTTGTAGCTTCCACATGCAAAGAACTGCAGGAATTGAGGGTTTTCCCATGTGTTCCATTTAGGCCTGGGGTTGCAGCTGTAACAGAAAATGGGCTCGTAGCAATATCAATGGGTTGTCCCAAGCTTCACTCACTACTCTACTTCTGCCAGCAGATGACAAATGCTGCTCTCATTACAGTGGCAAAGAACTGCCCAAATTTTATCCGCTTTCGTCTGTGCATCCTGGAGCCCACAAAACCTGACCCAGATACAATGCAGCCTCTAGATGAAGGGTTCGGGGCAATTGTACAGTCTTGCCGACGACTTAGGCGGTTGTCGCTCTCTGGCCTGTTGACTGATAAGGTTTTTCTCTACATTGGAATGTACGCTGAGCAGCTGGAAATGCTGTCTATTGCATTTGCTGGAGAAAGTGACAAGGGAATGCTCTATGTGCTGAATGGATGTAAGAAGCTAAGGAAGCTGGAGATAAGAGATAGCCCTTTTGGCAACATGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGACCCTTGGAGCCTGCAAGTCACTGGCTAAGAAGATGCCTAGGTTAAATGTGGAGATCATAAATGAGAATGAACAGGAAGAGAGTAGTGTGGAAGATGAGCAGAAAGTAGAGAAGATGTATTTGTATCGAACATTGGTGGGGAGAAGAAAAGATGCACCAGAATTTGTATGGACTCTGTAG 1743 0.467 MNYFPDEVLEHVFDFVTSHRDRNAVSLVCKTWYRVEKCSREKVFIGNCYSISPERLIQRFPGLKSLTLKGKPHFADFNLVPHDWGGFLYPWIEALAKNRVGLEELRLKRMVVSDESLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRLLFFKKRRFLRELDLQENEIEDHKGQWLSCFPDTCTSLVSLNFACLNGEINVGALERLVARSPNLKSLKLNPAVPLDTLQRILMRAPQLVDLGTGSFVHDPDSETYAKLKNTILKCKSITSLSGFLEVAPRCLPAIYPICSNVTSLNLSYAAGLEGNDLIKLIRHCRKLERLWILDCIGDKGLGVVASTCKELQELRVFPCVPFRPGVAAVTENGLVAISMGCPKLHSLLYFCQQMTNAALITVAKNCPNFIRFRLCILEPTKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGLLTDKVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDSPFGNMALLTDVGKYETMRSLWMSSCEVTLGACKSLAKKMPRLNVEIINENEQEESSVEDEQKVEKMYLYRTLVGRRKDAPEFVWTL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1644 580 Pfam F-box 2 41 IPR041567 -
Sto8g1644 580 PANTHER PROTEIN AUXIN SIGNALING F-BOX 3 2 577 - -
Sto8g1644 580 SMART LRR_CC_2 434 457 IPR006553 -
Sto8g1644 580 SMART LRR_CC_2 291 316 IPR006553 -
Sto8g1644 580 SMART LRR_CC_2 374 398 IPR006553 -
Sto8g1644 580 SMART LRR_CC_2 317 340 IPR006553 -
Sto8g1644 580 SMART LRR_CC_2 124 149 IPR006553 -
Sto8g1644 580 SMART LRR_CC_2 99 123 IPR006553 -
Sto8g1644 580 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 2 577 - -
Sto8g1644 580 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Sto8g1644 580 SUPERFAMILY RNI-like 16 540 - -
Sto8g1644 580 Coils Coil 157 177 - -
Sto8g1644 580 Gene3D Ribonuclease Inhibitor 41 580 IPR032675 -
Sto8g1644 580 Gene3D - 1 40 - -
Sto8g1644 580 SMART fbox_2 4 45 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1644 Sto-Chr8 10547455 10549626 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1644 - - gmx:100812516 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1644 8 10547455 10549626 Sto8g1644 8 10547455 10549626 ECH