Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1615 ATGGTGAGCGTTGATGAGATCCGCAAGGCCCAGCGTTCCCAAGGCCCCGCCACCATCTTGGCCTTCGGAACCGCCACTCCCACTAACTGCGTAACCCAAGCTGACTACCCCGACTACTACTTCCGCATCACACAAAGCGACCACATGACCGATCTCAAAGACAAGTTCAAGCGCATGTgCGAGAAGTCGATGATCAAGAAGCGGTACATGCACCTGACGGAGGAGATTCTGAAGGAGAACCCAAACATGTGCGCGTACATGGCTCCCTCTCTGGACGCGCGTCAGGACATAGTGGTGGTGGAGGTACCAAAGCTTGGCAAAGAAGCAGCCTCCAAGGCAATCAAGGAATGGGGTCAACCAAAGTCCAAAATCACTCACCTAGTCTTCTGCACCACCTCCGGCGTCGACATGCCCGGAGCCGATTACCAGCTCACTAAGCTTCTCGGCCTCAGGCCCTCCGTCAAGCGCCTCATGATGTACCAGCAAGGCTGCTTCGCCGGCGGCACCGTCCTCCGCCTCGCCAAGGATCTCGCCGAGAACAACAAAGCCGCCCGCGTTCTCGTCGTTTGCTCCGAGATCACCGCCGTCACTTTCCGCGGCCCCTCCGATACTCACCTCGACTCCCTCGTCGGTCAGGCGCTTTTTGGCGACGGCGCGGCCGCTATGATTATCGGCGCAGATCCGGATACCTCCGTGGAGAGGCCGATCTTCGAGATGGTTTCGGCGGCGCAGACGATCTTGCCGGACTCCGACGGGGCCATCGACGGGCATCTGAGAGAGGTGGGGCTTACGTTTCACTTGCTGAAGGACGTTCCGGCGATTATCTCTAAGAACATCGAGAAGAGCTTGGTGGAGGCGTTTTCTCCGATTGGAATCAACGACTGGAATTCCATCTTCTGGATCGCACACCCTGGTGGGCCGGCGATTTTGGACCAGGTGGAGGCCAAACTTGGGCTTAAAGAAGAGAAACTGCGTGCGACGCGGCACGTGCTGAGCGAGTACGGGAACATGTCGAGCGCGTGCGTTATCTTCATTCTGGACGAGATGAGGAAGAGGTCGGTGGAGGAAGGGAAGGCCACCACCGGAGAAGGGTTGGAATGGGGGGTTCTGTTTGGGTTTGGGCCGGGCCTGACGGTGGAGACGGTGGTGCTGCACAGTGTGTCGGTGTAG 1170 0.5838 MVSVDEIRKAQRSQGPATILAFGTATPTNCVTQADYPDYYFRITQSDHMTDLKDKFKRMCEKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAASKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKAARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDTSVERPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPAIISKNIEKSLVEAFSPIGINDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLRATRHVLSEYGNMSSACVIFILDEMRKRSVEEGKATTGEGLEWGVLFGFGPGLTVETVVLHSVSV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1615 389 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Sto8g1615 389 Pfam Chalcone and stilbene synthases, C-terminal domain 238 387 IPR012328 -
Sto8g1615 389 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Sto8g1615 389 SUPERFAMILY Thiolase-like 235 386 IPR016039 GO:0016746
Sto8g1615 389 PANTHER CHALCONE SYNTHASE 2 2 388 - -
Sto8g1615 389 Gene3D - 236 389 IPR016039 GO:0016746
Sto8g1615 389 CDD CHS_like 16 384 - -
Sto8g1615 389 PIRSF PKS_III 2 389 IPR011141 GO:0009058|GO:0016747
Sto8g1615 389 SUPERFAMILY Thiolase-like 1 233 IPR016039 GO:0016746
Sto8g1615 389 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 2 388 IPR011141 GO:0009058|GO:0016747
Sto8g1615 389 Gene3D - 1 235 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1615 Sto-Chr8 10378472 10379710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1615 105 385 Acyl Lipid Metabolism Gene Families AT1G62640 24.272 7.43e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1615 K00660 - tcc:18601149 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1615 8 10378472 10379710 Sto8g1615 8 10378472 10379710 ECH