Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1581 ATGTGGAAAGTTTGGATTTGGAAATGGGTTatggtggtggggatgatggGTTGGTATGTAGAAGGGCTAGGGGTGAATTGGGGAACTCAGGCAACCCATATGTTGCCTCCAGACACGGTGGTTCAGATGCTGAAGGACAATGGGATTCAGAAGGTGAAGCTATTTGATGCAGATGACTCCACCATGAAAGCTCTTGCTGGCACTTCCATTGAAGTCATGGTCGCCATCCCTAACAATCAGCTTGCTGCCATGAATGACTTTGATCGAGCCAAACAGTGGGTTCGCAAGAATGTCACGCGTTACAACTTCAAGGGAGGAGTTAACATCAAGTATGTAGCAGTAGGGAATGAGCCATTTTTGAAATCCTACAACAACTCATTCTTGAACATCACCTTGCCAGCACTACAGAACattcaaaatgcccttaatgAAGCCAACGTAGGAGACACCGTTAAGGCCACCGTGCCCTTAAATGCGGATGTATACGAGTCTCCAGCCGATAACCCTGTTCCATCAGCTGGAAGATTCAGGCCCGACATAGCTGATCTCATGACCCAAATAGTCCAATTCCTGAACAAGAATGGTGCACCATTCACTGTAAACATCTACCCCTTCTTAAGTCTCTATGGGAATGATGATTTCCCTTTTGACTATGCCTTCTTTGATGGGGCAGCCAATCCCATAAATGACAATGGCACTCCATACACCAACGTTTTCGATGCAAACTTTGATACACTGGTTTCTGCCCTAACTGCAGTAGGCTATGGTAGCATGCCCATTTTGGTAGGAGAAGTTGGCTGGCCTACAGATGGAGACAAGAATGCTAATGCAGGCAATGCATTAAGGTTCTACAATGGCCTTCTCCCTAGGCTTGCAGCTAATAAGGGTACCCCACGCCGTCCCGGGTACATTGAAGTCTATCTATTCGGACTCATAGATGAGGATGCTAAAAGTATTGCTCCAGGAAACTTTGAGCGTCACTGGGGAATTTTCAGGTATGATGGACAACCCAAGTTCCCTATGGATCTTTCTGGTCAGGGACAGAACAAGATGCTTATTGGTGCTCAGAATGTGAACTATCTTCCCCAGCAATGGTGTATGTTCAATCCAGATGCTAAGGATCTTAGCACACTTGCagataatataaattatgcTTGTACTTTTGGAGATTGTACTTCTCTTGGATATGGTTCTTCTTGCAATATGTTGGATGCTAATGGGAATGCCTCTTATGCGTTTAACATGTATTACCAGGTGCAGAATCAGGATGATATGGCCTGCAATTTTCAAGGTTTGGCCAAGCTAACTACACATAATATTTCACAGGGAAATTGCAATTTCATTATTCAGATTGCTCCTTCATCATCCTCTTGCTTGAGGTTTTCATTGCTGCATTATGTATTCTTCATCACACTATCTGTGATTCTATTTTTGTAG 1437 0.4259 MWKVWIWKWVMVVGMMGWYVEGLGVNWGTQATHMLPPDTVVQMLKDNGIQKVKLFDADDSTMKALAGTSIEVMVAIPNNQLAAMNDFDRAKQWVRKNVTRYNFKGGVNIKYVAVGNEPFLKSYNNSFLNITLPALQNIQNALNEANVGDTVKATVPLNADVYESPADNPVPSAGRFRPDIADLMTQIVQFLNKNGAPFTVNIYPFLSLYGNDDFPFDYAFFDGAANPINDNGTPYTNVFDANFDTLVSALTAVGYGSMPILVGEVGWPTDGDKNANAGNALRFYNGLLPRLAANKGTPRRPGYIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQGQNKMLIGAQNVNYLPQQWCMFNPDAKDLSTLADNINYACTFGDCTSLGYGSSCNMLDANGNASYAFNMYYQVQNQDDMACNFQGLAKLTTHNISQGNCNFIIQIAPSSSSCLRFSLLHYVFFITLSVILFL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1581 478 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Sto8g1581 478 Gene3D Glycosidases 22 350 - -
Sto8g1581 478 Pfam X8 domain 364 433 IPR012946 -
Sto8g1581 478 Gene3D - 360 458 - -
Sto8g1581 478 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 3 462 - -
Sto8g1581 478 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Sto8g1581 478 SMART X8_cls 364 447 IPR012946 -
Sto8g1581 478 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Sto8g1581 478 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 3 462 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1581 Sto-Chr8 10136925 10138927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1581 9 451 Miscellaneous Gene Families AT1G64760 78.104 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1581 - - gmx:100815300 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1581 8 10136925 10138927 Sto13g0267 13 2386999 2390666 CCT
Sto8g1581 8 10136925 10138927 Sto8g1581 8 10136925 10138927 ECH