Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1575 ATGGATTCGACATCACAAAGCTCCGGATCGCTCCAAGATCGAGTAGCGATTGTCACCGGTGCGTCCCGGGGAATCGGTCGAGAGATTGCACTTCATCTGGCTTCGCTGGGTGCGAGAATCGTGGTCAATTACACTTCCAACTTGCCCCAAGCTGAGTCTCTTGCCGCTCAGATcaattcctcctcctcctctggcgCTAATCCCCGAGCTATCGTCGTTCGAGCTGATGTTTCCGACCCCAACCTGGTGAAATCCCTCTTCGATGAGGCTGAGAAGGCCTTCAACTCGCCCGTTCATATTCTGGTTAACTCGGCCGGTGTTCTTGACAGTAAATACTCTTCCATAGCCAACATTTCCTTTGAGGATTTTGATTATATTTTCAGTGTGAATGCAAGAGGGGCATTCCTGTGCTGTAAAGAGGCAGCAAACCGTTTGAAACGTGGGGGTGGAGGTCGAATTATTATGGTAACTTCATCATTGGTAGGCTCATTGAGACCTGGGTTTGGGGCATACGCAGCATCTAAGGCGGCTGTAGAGACAATGGTGAAGATTTTAGCTAAAGAGCTGAAAGGTACGGGAATTACAGCTAATTGTATTGCGCCAGGGCCAATTGCAACAGAGATGTTCTTTGCTGGGAAAACTGAAGAGCAAGTGAAGCAGGCAATTGAACAGTCTCCACTATGTAGGCTTGGCGAGACAAAGGATGTAGCTCCAGTGGTGGGTTTCTTGGCCACTGATGCTAGTGAGTGGGTCAATGGTCAGATCCTGGTCAACAACGCTGCTCTGGCCAACCTTAAGCATTCCACCATGTTCTTTGCAGGGGTAAATGAGCAGATCGTAAAAATGGTGAGTGATGAATGCCCAATGGGTCGGTTTGGAGAGACTAAAGATGTGGCGTCCATTGTGAACTTTCTGGCCACTGATGCTAGTGAATGGATTAATGGACAGGTTATTCTTGCCACCGGCGGCCTAGTTTGA 978 0.4765 MDSTSQSSGSLQDRVAIVTGASRGIGREIALHLASLGARIVVNYTSNLPQAESLAAQINSSSSSGANPRAIVVRADVSDPNLVKSLFDEAEKAFNSPVHILVNSAGVLDSKYSSIANISFEDFDYIFSVNARGAFLCCKEAANRLKRGGGGRIIMVTSSLVGSLRPGFGAYAASKAAVETMVKILAKELKGTGITANCIAPGPIATEMFFAGKTEEQVKQAIEQSPLCRLGETKDVAPVVGFLATDASEWVNGQILVNNAALANLKHSTMFFAGVNEQIVKMVSDECPMGRFGETKDVASIVNFLATDASEWINGQVILATGGLV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1575 325 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 5 259 - -
Sto8g1575 325 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 269 325 - -
Sto8g1575 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 271 324 IPR036291 -
Sto8g1575 325 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 202 - -
Sto8g1575 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 IPR002347 -
Sto8g1575 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 IPR002347 -
Sto8g1575 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 IPR002347 -
Sto8g1575 325 Gene3D - 266 325 - -
Sto8g1575 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 257 IPR036291 -
Sto8g1575 325 Pfam Enoyl-(Acyl carrier protein) reductase 274 324 - -
Sto8g1575 325 Pfam Enoyl-(Acyl carrier protein) reductase 20 257 - -
Sto8g1575 325 Gene3D - 1 262 - -
Sto8g1575 325 PRINTS Glucose/ribitol dehydrogenase family signature 15 32 IPR002347 -
Sto8g1575 325 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Sto8g1575 325 PRINTS Glucose/ribitol dehydrogenase family signature 145 161 IPR002347 -
Sto8g1575 325 PRINTS Glucose/ribitol dehydrogenase family signature 171 190 IPR002347 -
Sto8g1575 325 PRINTS Glucose/ribitol dehydrogenase family signature 192 209 IPR002347 -
Sto8g1575 325 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
Sto8g1575 325 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 158 186 IPR020904 GO:0016491
Sto8g1575 325 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 269 325 - -
Sto8g1575 325 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 5 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1575 Sto-Chr8 10113996 10116517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1575 11 257 Acyl Lipid Metabolism Gene Families AT3G46170 33.333 9.75e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1575 K00059 - pvy:116113569 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1575 8 10113996 10116517 Sto8g1575 8 10113996 10116517 ECH