Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1574 ATGGCAATTGCACGAACGGGAATATACGTCGACGACTATTTGGAATaTGCAAGCACATTGCCTGCTGAACTTCAGAGACTGCTCAACACCATCAGGGAACTCGATGAAAGATCCCAATGTAAATGTTCTCTATTTGTCAAATGCATATGTTTGCATTTTTATATACCACTAATCTGGCTTGTTAATCCTAACAGTATCCATAACTATAATAACAGTAACACCAATGAAGAAGAGGACGCAGCTATTGAGAAAATGCATAAAGAAATTGAGGCTAATCAGGATAGTGCCTTAAGTCTATGTACCGAGAAGGTTTTATTGGCACGGCAAGCATATGACCTGATAGATAGCCATATAAAACGACTTGATGAGGATTTGAACAACTTTTCTGAAGATCTAAAGCAAGAAGGCAAAATACCTCCAGATGAACCAGCTATTCTCCCCCCATTGCCTATAGTCCCAAGAAGCGAAAAACGTAGGTCCTTATATGGAGCGCCTCTATCAAGGAGACCTGATTACAGAGATAGAGAGTGGGATCGGGAGCGTGACAGGGATTTTGAGCTCATGCCTCCACCAGGAAGCCATAAGAAGGAATATGCGATTCCCATGGATGTTGATCAACCAATTGAACCAAATGAACCTACATACTGTGTTTGTCATCAGGTGTCTTTTGGAGATATGATTGCATGTGACAACGAAAATTGCCAAGGAGGTGAATGGTTCCATTATTCATGTGTTGGCCTAACTCCGGAGACAAGATTCAAGGGAAAATGTCTCTGCTATGCGTTGTTGATTCGCATTTCTAAGCAAGTTGAATATAAGCCAGATGTGGAAGTGCACGATTGA 843 0.414 MAIARTGIYVDDYLEYASTLPAELQRLLNTIRELDERSQCKCSLFVKCICLHFYIPLIWLVNPNSIHNYNNSNTNEEEDAAIEKMHKEIEANQDSALSLCTEKVLLARQAYDLIDSHIKRLDEDLNNFSEDLKQEGKIPPDEPAILPPLPIVPRSEKRRSLYGAPLSRRPDYRDREWDRERDRDFELMPPPGSHKKEYAIPMDVDQPIEPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTPETRFKGKCLCYALLIRISKQVEYKPDVEVHD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1574 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 207 262 IPR013083 -
Sto8g1574 280 CDD ING_plant 17 125 - -
Sto8g1574 280 PANTHER INHIBITOR OF GROWTH PROTEIN 2 260 IPR028651 -
Sto8g1574 280 Gene3D - 5 126 - -
Sto8g1574 280 SMART ING_2 9 128 IPR024610 -
Sto8g1574 280 PANTHER PHD FINGER PROTEIN ING2 2 260 - -
Sto8g1574 280 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 128 IPR024610 -
Sto8g1574 280 CDD PHD_ING 215 257 - -
Sto8g1574 280 SMART PHD_3 215 263 IPR001965 -
Sto8g1574 280 SUPERFAMILY FYVE/PHD zinc finger 190 260 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1574 Sto-Chr8 10109766 10112997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1574 K11346 - gmx:100787916 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1574 8 10109766 10112997 Sto8g1574 8 10109766 10112997 ECH