Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1566 ATGAGACCTCCGAGAGGTGGCCGTGGCGGCGGATTTAGAGGTGGTCGTGATGGTGGCGGATTTAGAGGTGGCCGTGATGGTGGCCGAGGCGGCGGATTTAGAGGCGGCCGGGGTGGCGGTCGCGGCGGCGGGGGCTTTCGTGATGAAGGCCCGCCCACCGAAGTCATAGAAATTTCAACATTTCTACATGCATGCGAGGGAGACGCAGTGACAAGGCTTACAAATGAAAAAATTCCCTTCTTTAATGCCCCTATATATCTGCAGAACATGACTCAGATTGGGAAAGTCGATGAAATATTTGGCCCTATTAATGAAGCTTACTTTTCTATTAAAATGATGGAAGGGATTGTGGCAACTTCATATTCACCTGGCgacaagttttatattgaccCAAGGAAATTGTTGCCCCTTGCGAGATTTCTTCCACAACCAAAGTATGTTCTTCCCGCTCCAAAGTGTAATCTGTTCATGTTTGGCATGATTTGTGTGATCTCAAATGGTTAA 504 0.4683 MRPPRGGRGGGFRGGRDGGGFRGGRDGGRGGGFRGGRGGGRGGGGFRDEGPPTEVIEISTFLHACEGDAVTRLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINEAYFSIKMMEGIVATSYSPGDKFYIDPRKLLPLARFLPQPKYVLPAPKCNLFMFGMICVISNG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1566 167 MobiDBLite consensus disorder prediction 1 51 - -
Sto8g1566 167 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 145 - -
Sto8g1566 167 Gene3D Probable tRNA pseudouridine synthase domain 51 142 IPR038664 -
Sto8g1566 167 Pfam Gar1/Naf1 RNA binding region 55 141 IPR007504 GO:0001522|GO:0042254
Sto8g1566 167 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 145 - -
Sto8g1566 167 SUPERFAMILY Translation proteins 57 130 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1566 Sto-Chr8 10069385 10070174 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1566 K11128 - gmx:100788981 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1566 8 10069385 10070174 Sto8g1566 8 10069385 10070174 ECH