Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1538 ATGCTCCTATTTTGGGAAATTGTTGGGAATGAGGAGTGGAATTCTGAAGCTCTGATAGCATCATATAAATATTCATCCCCTAATGCCTCTTCCTCTTCCACTTCAACTCCTGCTATTGCTATAGCTGCGTCCCCTGCTTCCATACAATCCTTCAAAAACCACACTACATGTGAATCTGACGACTACAATTCTCAACTCTCTCTCATGCAAAATCTATTGGATTCAAGGTGCCAATTGCCAACTGCCAAGTGCAATTTTGAAatggttacaacttacaagagaTTGGATTTCGAAAACCCATCAAACATAGTTGCCATAAGGGTTGAAGCAGGGCAAAAGTGTGTAGGCCATATTACCTTACGCAATGTGATGTACACTATGCCAGTGGCCTATAGGCTTCAGCCAATGATCAAGACTCGTTATACCGTGAAGCCTCAATCTGGGATTATATCTCCCTTAGCCACACTCACTATAGAGATAGTGTACCATCTCCCACCAGCTGCTAATCTTCCTCATTCTTTTCCTCATTGCGATGACTCTTTCCTTCTGCACAGCGTGGTGGTTCCTGGGGCAGCCATTAAGGAGCCTTCCTCCATGTTTGATGTTGTTCCCATCGACTGGTTCACCACTAAGAAGAAGCAAGTCTTCATTGACAGTGGAATCAAGATCATGTTCGTGGGTTCCTCAATTCTGGCTCAACTCGTTGCACATGGTTCCATGGATGAAATCAGGGAGGTTCTAGAACGGAGCGACCCATCATGGAAGGCTCCGGATTCAATGGACTCACAAGGTCAAACCCTCCTTCACTTGGCAATTTCACAGAGCAGACCGGATCTCGTTCAATTACTCCTGGAATTCGAACCGGACATAGAAACCCCGAGTCGTTCCCGTTCCGGCTCCGGGTCAACCCCGCTTGAGGATGCGTGTGCCTCCGGAGAAGCCTTGATAGTTGAGCTTCTATTGGCTCACAAGGCCACCACGGAACGATCAGAATCGTCGTTCTTAGGGCCGATTCATCTCGCGACTAAAGAAGGACATATGGATGTCATGAGGCTTCTATTGCTAAAAGGGGCTAAAGTAGACTCTCAAACAAAAGATGGTAACACGGCGTTACACATCGCCGTCCAAGAGCGAAGACGGGATTGCGCTAGACTCCTTCTAGCAAACGGAGCCAGAACGGACCTCCGTAACGCCAGAGACGGAGATACCCCTTTACACATAGCCGCCGCCATGGGAGACGAAAACATGGTGAAGCTATTACTACAGAAGGGATCTAATAAGGACGTAAGAAATGGATTGGGGAAAACCGCATACGACGTCGCAGCGGAGAACGGCCACACGCGTCTCTTCGACGCGCTTAAATTAGGCGATAGTCTATGCGTGGCGGCGAGAAAAGGGGAAGTGAGAACAATACAGAAGCTATTGGAAGCCGGAGCCGCCATTAACGGGAAAGACCAACACGGATGGACGGCGCTTCATAGAGCGGCGTTCAAAGGGCGAATAGATGTGGTTCGAGCTCTGGTAGAGAAAGGGGTGGATGTGGACGCGAAGGATGAAGATGGGTACACGGCGTTGCATTGCGCGGCGGAGTCGGGTCACGCGGATGTGACGGAGATGTTGGTGAAGAAGGGAGGAGATGTGGAAGCGAGGACGAATAAGGGAGTGACAGCTCTGCAAATAGCAGAGTCCCTACACTATGTGGGGATCACAAGGATATTGGTGAATGGTGGGGCTAGTAGGGAGAGTGGGGGTCAGATTATAGCACCACCTGTGATTCCGTTTGGGAATAAGATGGAGGgtggagagaagaagaagaagaagacgatgaTGGCTAGGAACAGGGGGCTTCGAGGTAGCTTTGATCGTTCACCGGCTTTGGCAGTGGTCTGA 1890 0.4825 MLLFWEIVGNEEWNSEALIASYKYSSPNASSSSTSTPAIAIAASPASIQSFKNHTTCESDDYNSQLSLMQNLLDSRCQLPTAKCNFEMVTTYKRLDFENPSNIVAIRVEAGQKCVGHITLRNVMYTMPVAYRLQPMIKTRYTVKPQSGIISPLATLTIEIVYHLPPAANLPHSFPHCDDSFLLHSVVVPGAAIKEPSSMFDVVPIDWFTTKKKQVFIDSGIKIMFVGSSILAQLVAHGSMDEIREVLERSDPSWKAPDSMDSQGQTLLHLAISQSRPDLVQLLLEFEPDIETPSRSRSGSGSTPLEDACASGEALIVELLLAHKATTERSESSFLGPIHLATKEGHMDVMRLLLLKGAKVDSQTKDGNTALHIAVQERRRDCARLLLANGARTDLRNARDGDTPLHIAAAMGDENMVKLLLQKGSNKDVRNGLGKTAYDVAAENGHTRLFDALKLGDSLCVAARKGEVRTIQKLLEAGAAINGKDQHGWTALHRAAFKGRIDVVRALVEKGVDVDAKDEDGYTALHCAAESGHADVTEMLVKKGGDVEARTNKGVTALQIAESLHYVGITRILVNGGASRESGGQIIAPPVIPFGNKMEGGEKKKKKTMMARNRGLRGSFDRSPALAVV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1538 629 PRINTS Ankyrin repeat signature 401 416 IPR002110 GO:0005515
Sto8g1538 629 PRINTS Ankyrin repeat signature 503 517 IPR002110 GO:0005515
Sto8g1538 629 Gene3D Immunoglobulins 86 224 IPR013783 -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat region circular profile. 337 361 - -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat profile. 337 365 IPR002110 GO:0005515
Sto8g1538 629 ProSiteProfiles Ankyrin repeat profile. 263 295 IPR002110 GO:0005515
Sto8g1538 629 Pfam Ankyrin repeats (3 copies) 245 325 IPR002110 GO:0005515
Sto8g1538 629 Pfam Ankyrin repeats (3 copies) 397 453 IPR002110 GO:0005515
Sto8g1538 629 Pfam Ankyrin repeats (3 copies) 337 396 IPR002110 GO:0005515
Sto8g1538 629 SUPERFAMILY PapD-like 99 241 IPR008962 -
Sto8g1538 629 SUPERFAMILY Ankyrin repeat 258 582 IPR036770 -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat region circular profile. 263 291 - -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat profile. 400 432 IPR002110 GO:0005515
Sto8g1538 629 Pfam Ankyrin repeats (many copies) 489 541 IPR002110 GO:0005515
Sto8g1538 629 Gene3D - 525 575 IPR036770 -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat region circular profile. 366 397 - -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat region circular profile. 520 552 - -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat region circular profile. 487 519 - -
Sto8g1538 629 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 98 629 - -
Sto8g1538 629 ProSiteProfiles Major sperm protein (MSP) domain profile. 85 226 IPR000535 -
Sto8g1538 629 Gene3D - 455 524 IPR036770 -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat region circular profile. 400 431 - -
Sto8g1538 629 Pfam MSP (Major sperm protein) domain 107 199 IPR000535 -
Sto8g1538 629 ProSiteProfiles Ankyrin repeat profile. 366 398 IPR002110 GO:0005515
Sto8g1538 629 ProSiteProfiles Ankyrin repeat profile. 487 519 IPR002110 GO:0005515
Sto8g1538 629 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 98 629 - -
Sto8g1538 629 Gene3D - 225 454 IPR036770 -
Sto8g1538 629 SMART ANK_2a 487 516 IPR002110 GO:0005515
Sto8g1538 629 SMART ANK_2a 520 549 IPR002110 GO:0005515
Sto8g1538 629 SMART ANK_2a 333 362 IPR002110 GO:0005515
Sto8g1538 629 SMART ANK_2a 263 292 IPR002110 GO:0005515
Sto8g1538 629 SMART ANK_2a 553 582 IPR002110 GO:0005515
Sto8g1538 629 SMART ANK_2a 454 483 IPR002110 GO:0005515
Sto8g1538 629 SMART ANK_2a 366 395 IPR002110 GO:0005515
Sto8g1538 629 SMART ANK_2a 300 329 IPR002110 GO:0005515
Sto8g1538 629 SMART ANK_2a 400 429 IPR002110 GO:0005515
Sto8g1538 629 ProSiteProfiles Ankyrin repeat profile. 520 552 IPR002110 GO:0005515
Sto8g1538 629 ProSiteProfiles Ankyrin repeat profile. 300 332 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1538 337 566 Miscellaneous Gene Families AT3G09550 29.787 3.83e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1538 - - csin:114284136 769.615