Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1534 ATGAGCCAAGGCGCTATGAATGTTGATCAACCTCAGGTAGCCACAAAGGTACGGACATTACAGAACCTAACAACAACAACCCCATTGGTTTCTTCTGTTTCTTCGCGATGCATACCCTCCGACAAAGACTTTCTCTTCTATAACACCTTCGACGAATTCAAAAATCCAATTCATGAAATCACTAAGAAGCCGCAGCCCGTGCTTGAAAACATCGCTACGGACGGTGCGTATCAGTGGTTGGTTAATGTGAATGATGATGTGTTTCAGCGCTTCAATGTGTCGCTGGATGAGTGTCAGGGGATTAGGAAGAAAGAGGAGGAGACTGGACGCCCGACGGCTTCATTGGCGGACTCGGAAAATGGGTTTCAGTTGGTCTATGGGAGGAAAAAGAAAGTGGGGAATATTCTGGAACCAGGGAAAGAGGTTGAACTAGACTCAGGCCCAGCCTCGGGTGTTAAAATGGCCACAAGGGACATAAAAACGACTGGGCAGAAGCCAAAGGTGCCGTTTCATATACCAACTATTAGGAGGCCTCAGGATGAGTATAACATTCTGGTTAATAATTCAAACCAGCCTTTTGATCATGTCTGGTTGCAGAGGAGTGATGATGGTCAGAGGTTTATTCATCCCCTGGAGAAACTCTCTGTTTTGGATTTTGTCAAAGATTATGGGAATATTGAGCCAATAAAGCCTCCCTCAATAGAATGTACACCTTTCAAGGTAGTGAAGGATGTTAAAGATTTGAAGGAGTTGGCTGCAAAGTTGCGTGCTGTCAATGAATTTGCGGTGGATTTAGAACATAATCAATATCGCTCTTTTCAAGGATTGACTTGCTTGATGCAAATCTCAACCAGGACTGAAGATTTTGTGTTAGACACTCTGAAGCTTCGTATTCATGTTGGGCCCTATCTAAGGGAAATTTTCAAGGATCCTACCAAAAGGAAGGTTATGCATGGAGCAGATCGAGATATTTTGTGGCTTCAACGGGATTTTGGCatttatatttgtaatttatttGACACTGGCCAGGTTGACAAGTCAACTCTTTGCAGATACCAGAATGCAGATTGGCGACTGCGCCCTCTTCCTAATGAGATGCTTAGATATGCCAGAGAAGATACGCACTatttgctgtatatatatgatttaatgaGAATGAAGTTATGTGCATTATCTAAGGAGACTCAAAGTTCTGATACTCCTCTGGTGGAGGTGTTTAAGCTCAGTTATGATGTCTGCATACAGTTATATGAGAAAGAGCTTCTGACTGAGAACTCCTACCTATATACATATGGGTTGCAAGGAGCTGGTTTTAATGCTCAGCAACTGGCCATTGTTTCAGGGCTATTTGAATGGCGGGATATTGTTGCTCGTGCAGAGGATGAGAGCACTGGCTATGTATTGCCAAATAAAACTCTTCTGGAAATTGCTAAGCAGATGCCTGTCAGTACAAGCAAGCTACGCAAATTAATAAAATCCAAGCACCCATATGTTGAGTGCAACTATGATAGCATTGTCAGCATTGTTATACATTCTATGCAAAATGCTTCTGCCTTTGAAGCAGTtgcaaaaaaattgaaagagggACGTGCCACAAATGCATCAAGTGTAATACCTGATAAATATGGAACTGAAGCTCTCCTGCCTAAAATGCCAAGCTCAAAGATCACAAATGCAAGAAAAGAAAGTATTGGAGTTGAAAGTGCCAAATCACCTATTTCTTTTCCCCTTAGAGGGGAGACTTTACAGCATCAAAATAAATGTGAACAATTAATATTTGAATCCAATAGTTGCACATCAGGATTTCTTATGGACAATCTCAACATTTCACAGCAGAACAGGGATGCAAATATTGGTACTCCTTCTACAGCAAAGGGTTATGGAACAAATGTTCAGGTGCTGAAAAGGCCTAGTCTTGCTTTTGGGGCACTGCTGGGTAACTCCACTTTTAAGAGTAAGCTCAATCCTGATGAAAAGGGCAAGGAAGACATCAAAATAGAGAAGATTAGATCTTCAGTCAATCTtcctttttattcatttttgggTAGCAATGACAAGTCAAGACTAGTCATAGAATCTCCTAGTGTAGCTTGTAAACATTCAGAGCCACAAAAGCCTATAAAGGTTCCAGAGAATATGACATGCAACAAACTAGAAAGCATAAATGAGCTCAAAGATAAAAGACACAGTCAAAATGAATCTCGACTGTCCAAGAAAACTCGAGAACCCAGTGGCTTATTGCAGCTGAAGCCACGTTTGATTATGAAGCGGCAAGGAAATATGTTAAGGTTTGAAGAAGATGCAGAGGAAGCATCTTCCCATAGTGATATGAAGATATTACACTTATGCGGGAGTTGGATAGCAAGAAGAAAAGGTCAATGA 2382 0.4039 MSQGAMNVDQPQVATKVRTLQNLTTTTPLVSSVSSRCIPSDKDFLFYNTFDEFKNPIHEITKKPQPVLENIATDGAYQWLVNVNDDVFQRFNVSLDECQGIRKKEEETGRPTASLADSENGFQLVYGRKKKVGNILEPGKEVELDSGPASGVKMATRDIKTTGQKPKVPFHIPTIRRPQDEYNILVNNSNQPFDHVWLQRSDDGQRFIHPLEKLSVLDFVKDYGNIEPIKPPSIECTPFKVVKDVKDLKELAAKLRAVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVLDTLKLRIHVGPYLREIFKDPTKRKVMHGADRDILWLQRDFGIYICNLFDTGQVDKSTLCRYQNADWRLRPLPNEMLRYAREDTHYLLYIYDLMRMKLCALSKETQSSDTPLVEVFKLSYDVCIQLYEKELLTENSYLYTYGLQGAGFNAQQLAIVSGLFEWRDIVARAEDESTGYVLPNKTLLEIAKQMPVSTSKLRKLIKSKHPYVECNYDSIVSIVIHSMQNASAFEAVAKKLKEGRATNASSVIPDKYGTEALLPKMPSSKITNARKESIGVESAKSPISFPLRGETLQHQNKCEQLIFESNSCTSGFLMDNLNISQQNRDANIGTPSTAKGYGTNVQVLKRPSLAFGALLGNSTFKSKLNPDEKGKEDIKIEKIRSSVNLPFYSFLGSNDKSRLVIESPSVACKHSEPQKPIKVPENMTCNKLESINELKDKRHSQNESRLSKKTREPSGLLQLKPRLIMKRQGNMLRFEEDAEEASSHSDMKILHLCGSWIARRKGQ 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1534 793 PANTHER 3'-5' EXONUCLEASE 32 705 - -
Sto8g1534 793 Gene3D - 174 424 IPR036397 GO:0003676
Sto8g1534 793 MobiDBLite consensus disorder prediction 725 740 - -
Sto8g1534 793 Pfam HRDC domain 442 505 IPR002121 GO:0003676
Sto8g1534 793 SUPERFAMILY HRDC-like 421 513 IPR010997 GO:0000166|GO:0044237
Sto8g1534 793 MobiDBLite consensus disorder prediction 725 746 - -
Sto8g1534 793 Gene3D HRDC domain 425 520 IPR044876 -
Sto8g1534 793 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 32 705 IPR045092 GO:0000175|GO:0000467
Sto8g1534 793 SUPERFAMILY Ribonuclease H-like 175 392 IPR012337 -
Sto8g1534 793 SMART hrdc7 439 523 IPR002121 GO:0003676
Sto8g1534 793 Pfam 3'-5' exonuclease 241 348 IPR002562 GO:0003676|GO:0006139|GO:0008408
Sto8g1534 793 Pfam 3'-5' exonuclease 351 388 IPR002562 GO:0003676|GO:0006139|GO:0008408
Sto8g1534 793 ProSiteProfiles HRDC domain profile. 439 519 IPR002121 GO:0003676
Sto8g1534 793 SMART 35exoneu6 239 389 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1534 Sto-Chr8 9769370 9777359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1534 K12591 - gmx:100815329 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1534 8 9769370 9777359 Sto8g1534 8 9769370 9777359 ECH