Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1501 ATGGAGTCGAGCATTCTTGAATCCATCGGCGTAGAGATCATTGGAGTGATGTCCCCCGTCTCCATTTGCATGTTCCTTGTTGTTCTCCTCGTCTATTCCCTCTCTTCCTCCGACCCCTTCTCTCCTGCTTCTGTCGATACCATTCGTACTGCTGCCAACCTCGTCTACGTTGAGAACCCTTCTGATTCTGCTTCCCAGAAGCTCGAAGGCGCCCTTCTCAATGCTTTGGTCTTCGTCATCTTGATCGCCCTTGTCACTTtccttcttgttcttctttaCTATTACAACTTCACCAATTTCCTCAAGAACTACATGCGTTTCTCCGCCTTCTTCGTTCTTGGCACCATGGGCGGATCCATCTTCTTGTCTGTCATTCAGAAGTTCTCCATTCCCCTTGATTCCATTACTTGTTTTCTCCTGCTTTTCAATTTCACTATTGTCGGTGTTCTATCCGTCTTTTCGGGTGGGATCCCTATTTTGTTGAGGCAAACCTACATGGTTTGTCTGGGGATTATTGTGGCCGCCTGGTTCACCAAATTGCCCGAGTGGACTACTTGGGTTTTACTCGTTGCATTGGCTGTTTACGATTTGGTCGCCGTTTTGGCTCCTGGTGGTCCGCTTAAGCTGTTGGTGGATTTAGCCTCAACTAGGGATGATGAGCTCCCTGCCTTAGTGTACGAGGCTCGTCCAACAGTCACTCGAACTGGGCAAATTGGAGCCCGGTCTTTAGGGCTCTTGGTCGCTGGGGTTTCGGATTCTTCATCAATCGAGCTTCAAGCTGTGTCAAGGGACAATAACGTCAATAGAAATTTGAACGAGGGTCGCACTAACTCTGATTATTCTGCTGTGACTATGGAGGATTTTCGGAATGAGGAGGTTCATAGTGACAGAGAAGATGGGGAGAGGTCGCCGCTGGTGAGTAATGTACGAGAAAGGCATTCATCAAGCATTCCATCCAGTGAAGCTCGGCAACTTAATAACAGGGACCCTGAAATTGTTGGTGAGGAAACGTCTCCCCTTGTTGAAAtgtttgaatttgggaatgaagGAAGGCAGATGAGGAGGGGTGATGTGGAGATTACTGACAGGGGAATTAAACTCGGTCTTGGAGACTTCGTTTTCTACAGTGTTCTTGTGGGTAGAGCTGCAATGTATGATCTTATGACAGTGTACGCTTGTTACCTTGCAATTATATCAGGACTAGGATGCACTCTTATTTTGTTGTCTGTGTGCCGTCGAGCTTTGCCTGCACTACCTATATCTATCGCACTGGGTGTTACTTTTTATTTCTTGACCCGATTACTAATGGAACCCTTCATTGTTGGGACAGCCACGAATTTAATGATGTTTTGA 1353 0.4575 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSSSDPFSPASVDTIRTAANLVYVENPSDSASQKLEGALLNALVFVILIALVTFLLVLLYYYNFTNFLKNYMRFSAFFVLGTMGGSIFLSVIQKFSIPLDSITCFLLLFNFTIVGVLSVFSGGIPILLRQTYMVCLGIIVAAWFTKLPEWTTWVLLVALAVYDLVAVLAPGGPLKLLVDLASTRDDELPALVYEARPTVTRTGQIGARSLGLLVAGVSDSSSIELQAVSRDNNVNRNLNEGRTNSDYSAVTMEDFRNEEVHSDREDGERSPLVSNVRERHSSSIPSSEARQLNNRDPEIVGEETSPLVEMFEFGNEGRQMRRGDVEITDRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRRALPALPISIALGVTFYFLTRLLMEPFIVGTATNLMMF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1501 450 PANTHER PRESENILIN 1 450 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto8g1501 450 MobiDBLite consensus disorder prediction 309 326 - -
Sto8g1501 450 MobiDBLite consensus disorder prediction 290 308 - -
Sto8g1501 450 Gene3D Presenilin 346 441 IPR042524 -
Sto8g1501 450 SMART psh_8 69 436 IPR006639 GO:0004190|GO:0016021
Sto8g1501 450 PANTHER PRESENILIN 1 450 - -
Sto8g1501 450 MobiDBLite consensus disorder prediction 290 332 - -
Sto8g1501 450 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto8g1501 450 PRINTS Presenilin family signature 179 186 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto8g1501 450 PRINTS Presenilin family signature 196 213 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto8g1501 450 Pfam Presenilin 10 440 IPR001108 GO:0004190|GO:0016021|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1501 Sto-Chr8 9570984 9572366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1501 1 450 Miscellaneous Gene Families AT1G08700 67.957 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1501 K04505 - jre:109007426 598.971