Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1497 ATGGGTGGAAGCGGTGGCCGGAAGGTCGGAGTTCTGAGAACAGAGGCCACCATCGAGAGCTCGGAGGGGAAGGGAGAGGGAGGGATAAGATCTTGTTCGCTACTGTATCGTAATCCATATTATTCGGGTGTCACTGCCAAAATGAAGCATCATCGCTGCAGGTTGATTCAAGCCTGTGCCGTTTGGATTTTGGTCTCACTGGAATTTAACCCAAAGGCATTAGTATCAGCTTCAAGTCACTGTGATTTTCCAGCCATCTTCAACTTCGGAGACTCTAATTCCGACACTGGTGGCCTCTCTGCTGCCTTCGGACAAGCTGGTCCTCCTCACGGACAGTCCTACTTTCACCACCCTGCCGGACGATACTGCGATGGCCGTCTTGTCATTGATTTCATAGCTAAGAAGCTGGGGCTACCTTATTTGAATGCTTACCTTGATGCGGTTGGCTCAAATTTTACACATGGAGCCAACTTCGCCACAGCTGGATCCACCATAAGGCCTCAGAATACAACCCTTCATCAGGTTGGTGGCTTCAGTCCTTTCTCTTTGGATGTTCAGTTCAATCAATTCAATGATTTCCAGCGAAGGTCTCAAACTTTTCGCAATAAAGGAAGAGTTTATGAAACATTGTTACCTAAAGCACAATACTTTTCTCGTGCATTATACACATTCGATATTGGGCAGAATGACTTGGCAGCTGGTTACTTCCACAACATGTCCACACATCAAATCAAAGCATATGTTCCTGATGTTTTAGCCCAGTTCAAGAACATAATTAAGTATGTGTATGACCATGGAGGGAGGTCATTCTGGATACACAATACGGGTCCTGTTGGTTGTTTGCCTTACATAATGGACCTCCATCAAGTTCCTGCAGCTCAGGTGGATAAAGCAGGATGTGCCATCCCTTACAATGAAGTTGCTCAATTCTTCAATCGCCAACTAAAAGCAGCAGTGATTCAACTCAGAAAGCAACTTCCCTTGGCTGCCATCACCTACGTTGATGTCTACTCGGTCAAGTACTCTCTCATCAGTCAAGCAAGGAAGCATGGTAAGCCCTTTACTAGAGCACCCTCGTTGACAATCGACTGTGCCTCCCCGGTTGACCCGGATGGTTACATATCAACATCTCTAGATGGGAACATTGTTCTGTCTCGAGGTTTTGAGGAACCCCTAAGAGCTTGCTGTGGGCATGGTGGGAAGTACAACTACAATATGCACATTGGGTGCGGAGCAAAGATAAAGGTTCATGGGAAAGAAATCTTGGTGGGAAAACCATGCAAGGATCCATCAGAATGGGTTAACTGGGATGGTGTGCACTACACTCAAGCTGCTAATAAATGGGTATTTGAGAAAATTGTGGATGGTTCTTTTTCGGATCCACCTATTCAATTGACCATGGCATGTCATAGGCACCACCACAGCTGA 1428 0.4622 MGGSGGRKVGVLRTEATIESSEGKGEGGIRSCSLLYRNPYYSGVTAKMKHHRCRLIQACAVWILVSLEFNPKALVSASSHCDFPAIFNFGDSNSDTGGLSAAFGQAGPPHGQSYFHHPAGRYCDGRLVIDFIAKKLGLPYLNAYLDAVGSNFTHGANFATAGSTIRPQNTTLHQVGGFSPFSLDVQFNQFNDFQRRSQTFRNKGRVYETLLPKAQYFSRALYTFDIGQNDLAAGYFHNMSTHQIKAYVPDVLAQFKNIIKYVYDHGGRSFWIHNTGPVGCLPYIMDLHQVPAAQVDKAGCAIPYNEVAQFFNRQLKAAVIQLRKQLPLAAITYVDVYSVKYSLISQARKHGKPFTRAPSLTIDCASPVDPDGYISTSLDGNIVLSRGFEEPLRACCGHGGKYNYNMHIGCGAKIKVHGKEILVGKPCKDPSEWVNWDGVHYTQAANKWVFEKIVDGSFSDPPIQLTMACHRHHHS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1497 475 CDD SGNH_plant_lipase_like 84 457 IPR035669 -
Sto8g1497 475 Gene3D SGNH hydrolase 72 456 IPR036514 -
Sto8g1497 475 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 387 471 - -
Sto8g1497 475 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 80 355 - -
Sto8g1497 475 Pfam GDSL-like Lipase/Acylhydrolase 86 453 IPR001087 GO:0016788
Sto8g1497 475 PANTHER BNAA06G32900D PROTEIN 80 355 - -
Sto8g1497 475 PANTHER BNAA06G32900D PROTEIN 387 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1497 Sto-Chr8 9546488 9550184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1497 84 460 Acyl Lipid Metabolism Gene Families AT4G10950 25.897 8.99e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1497 - - gmx:100819985 657.907