Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1466 ATGCCTTCAGGTGGAAGGATACCATTGGATCATGGGAGAAGAGACCAGCTCGCAGAGGACCTCAATGCAGCCCCAGTATGGGTATTTAACGCTGGCATTAGCCATCATGATGAAATCAATACCACCGACATTGCTCTTGATGGGATTGAATTTGCAAGAGGTCCCACAACATCAAGGTGGGGCCGTGTAAGGGCAGGTTTGGGACATCCTAGGCCATTCGATCTACGTATGGTAGCCATTGGAAACGAGAATTGTGGGTTTTATAACTACAGAGGAAACTACTTAAAATTCCACGACGCCATAAAGCGTTACTACCCAGACATGAAAATCATCTCAAATTGTGATGCCACTTTTGCTCCGTTGGATCACCCAGCTGATTTGTTCGACTTCCATATCTATTCGACGTCCAAGGATTTGTTCTCGAAGTACAATAAATTCGATTCCCTCAATCGTACTGGCGCCAAGGCTTTCGTTAGCGAGTACGCTGTTTGGAAAGAGGATGCTGCAGCTGGCTCTTTCTTGTCTGCTTTGGGTGAAGCAGAATCGAGTGGAGCTACATATTTGAACTCGAAGCTTGAAGCTCCTTCTTCAGTTCTTGCATCTACAATTgttgtgAACTTTGACAACAGTTCTGTGTCTCTTGATATTACAATTAATGGTTTGGGGTCAAATGAGAAGTTTTCTGGAATAACGAAGACATTTCTTGCATCTTCCAACGTGAGGGATGAGAACTCCTTCGATCATCCAAAAAAGATTGTACTACAACAAAGTCCACTTGAGAATGCAGGCTCAAACATGAAAGTCACATTTCCTCCCAATTCAATAACGTCGTTTGATTTGCCGAAATGA 849 0.4335 MPSGGRIPLDHGRRDQLAEDLNAAPVWVFNAGISHHDEINTTDIALDGIEFARGPTTSRWGRVRAGLGHPRPFDLRMVAIGNENCGFYNYRGNYLKFHDAIKRYYPDMKIISNCDATFAPLDHPADLFDFHIYSTSKDLFSKYNKFDSLNRTGAKAFVSEYAVWKEDAAAGSFLSALGEAESSGATYLNSKLEAPSSVLASTIVVNFDNSSVSLDITINGLGSNEKFSGITKTFLASSNVRDENSFDHPKKIVLQQSPLENAGSNMKVTFPPNSITSFDLPK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1466 282 Gene3D - 203 280 IPR013780 -
Sto8g1466 282 SUPERFAMILY (Trans)glycosidases 16 183 IPR017853 -
Sto8g1466 282 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 181 280 - -
Sto8g1466 282 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 16 180 - -
Sto8g1466 282 Pfam Alpha-L-arabinofuranosidase C-terminal domain 183 274 IPR010720 GO:0046373|GO:0046556
Sto8g1466 282 SMART alpha_l_af_c 159 274 IPR010720 GO:0046373|GO:0046556
Sto8g1466 282 Gene3D Glycosidases 15 202 - -
Sto8g1466 282 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 181 280 - -
Sto8g1466 282 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 16 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1466 Sto-Chr8 9362531 9364304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1466 9 282 Glycoside Hydrolase AT3G10740 43.429 6.99e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1466 K01209 - zju:107423410 275.018