Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1449 ATGGTTCTTGAAGGCAAAGTGGTAAGTGGGAGTGGGATGTTTCGCTTTCCTCCCGTCCCACCTCTACTATGCTGCCGCAATACAGAGGCCTCAAGCTCAGATCTGTTGCTGCCACTCGCTTCGCTGGCTCGCCGGCTTCCGTCTCTTCAATCGCTCGTCGCAGTGGACGCGTCGTGTGCGAATCTCAAGGTACCGCCGGTGAAGTCTGCGACAAGTGGTAGTCGCGTTCGAATGGCTCCCATGTTTCGTCCTCCACGAAGATCGCCGGAGCTGTTCTTCCATGTTTTCTTCTCCCATCCTCCTCATCATCTCCGTTATTTGGCAAACGCGCAAGCGTCCCCGTCGATGGCTTCTCAGAAAACGCCGGCAAAGTCGTCGCCGGTAACTTTCTTGTTAGCCTCCTTCCTGATTTCTTCTTGCTCGACAAGTGTCGTTGTCGACACTGAAACCCCAACTGCATCTGGTAGTGTGGGAATGTTTGCTGGTAGCAAATTTCAGCCAGCGCCTTGGTCGATCTCCTCTATTATTGCGCCGAAGTCGGACTCCTTCATCACTACCACCATCATCGCACCAGGTGCTGTGGCCACCATATATAATAAGAGACCCAACTCTGCGATGAAGACGGCAAAGGTCATTGTTGCCGACCAAGCCGAAGTAGAGGATGCATATCTCTCCAGAGTTAGCACTGGAAATTCTGCCGTTGCAGCCATCAGTAGACGCATATGTGTGGCGTCTACCACTTTTATTGCCACCGATGGCAGCCTAAAACTTTCTATTGTGGATCATAGCTCATCTTCGCCGCTTCATGAGGCCCGCAGAGTGGTAATGGTTGCCTTTGTTGGGGTCGGATTTACTATCCCTTATGCCGGAGCAGTAGGCTTCAAACCGTCGAACGACATCGCTGGAGTGTGGGCTGGTCGAGTCTCTTGGTCGATGTCCCTTTCCTTGCCGGACCACCATCCTCCGGCCGCCACAAAGAGCTTGCAAAAGTTAATGCTAGTTTATGAGATTTGGAGATATGATAATTTAGAAGTTGCAAGAttaagCTCTTTGCGCTTCGTAGCGCTTCCTCCCACCGTCAATTATGGGCAAAGGCGTAGTCTCGGACGAAGAAGGCGAGCCCTAGAAATTTCCCAATTTCTCTTTGCATTTTACGAGGTCGAATTCGAAGAGGATGAGCGGGAGCCAGCTGATGGAGATGGATTAGACATGGATGACGAGGACGAGGACGAAGAAGAAGGTATGAACTGGGGGAATTCTCTGAACCCCGTTGAGGAGGAGTACGTTCTTGATGAAGATGATTATGAGCTCCTGGAGGACAATAATATCAATATTCACCGACGCAAGGAGAGCAAAAAGTTTAAGCGGTTGAAGAAAGGTCAGAGGGATACTGAGGATGAGCCCTCTGGGTTATCTGATGAGGAGGAGTTTGTTGGAAGTGGTAAAGGTGGGCGAACTGCTGAGGAGAAGCTTAAACTTAGTTTATTTGGTGATGATGAAGGAGCTCCACTTGAAGACATTGCTGAAGAGGAGGAACAaggagaggaagaggaggatgCTGACATtggtgaagaagatgaaatgGCAGACTTCATTGTGGATGAGGAAGAAGTTGACGAGCATGGAGCTCCTATGAGACGAAGGAagctgaaaagaaagaaaactagGCAGGCACCAGGAGTCTCTTCTTCTGCTTTGCAAGAAGCTCAGGAATTATTTGGTGATGTTGATGAGTTGCTGCAGTCTCGCAAGCAAAGTCTACAATCACGAGAAAATAGAGAGACTAGACTTGAAGATGAATTTGAACCAATTGTTCTTTCTGAGAAGTATATGACAGAGAAGGATGACCGGATTAGGGAGATTGATATTCCAGAAAGAATGCAGGTGTCAGAGGAGAGTACTGGTGCACATCCAGATGCTAGTAGTATAGGTGAGGAGAGTAACTGGATACATGAGCAACTTAAAAAGGGAACGGTGCCTGGGATACACAAGGATGATAAAGGCAATATACCAATTGACAGTAATGATATTGTCAGATTTTTGGAACTGCACCATGTTCAGAAATTAGATATTCCTTTTATTGCCATGTACCGGAAGGAGGAGTGCTTAAGCCTATTGAAAAATCCTCAGCAACCTGGCATGGATGAGAATTTCGATAAGAATGAAAAGACACCAACTTTAAAATGGCACAATGTACTTTGGGCAGTTCATGACTTGGACAGAAAATGGTTGCTtcttcagaaaagaaaaagtgccCTCCAAGCATACTATAATAAACGATTTGAAGAAGAGTCCCGCCGTGTTTATGATGAAACAAGACTTGAATTGAACCATCAATTATTTGAATCAGTTATGAGATCACTGAAGGCTGCAGAAACAGAGAGGGAGGTTGATGATGTTGACTCCAAATTCAACTTGCATTTTCCACCAGGTGAAGTTGGTGTTGATGAAGGACAATATAAAAGACCTAAAAGGAAATCAGCATATAGTTCTTTCAGTAAAGCTGGGCTTTGGGAGGTTGCAAGCAAGTTTGGGCGTAGTTCTGAGCGACTTGGAATGATTCTATCATTAGAAGAATTAGAAGAAATAATGACTGAATTGGAGGATCCTAAGGAAACACCAGAGGAGATGGCTTCAAACTTTACATGTGCTATGTTTGATACCCCTCAAGAAGTGCTTAAATGTGCTAGACACATGGCAGCTGTTGAGATAAGTTGTGAGCCTAGCATTAGGAAGCATGTTCGTGCCAATTTTATTGACCATGCTGTGGTGTCAACTTGTCCCACTGCGGATGGAAATGTAACTATAGATTCTTTCCATCAGTTTGCTGGGATAAAGTGGTTGCGGGAGAAGCCGCTGTCTAAATTTGAAGATGCACAATGGCTCCTTGTACAGAAGGCGGAAGAGGAGAAACTCCTTCAAGTTACTATTAAGCTGCCTGAAGAATATCTTGACAAGTTGACAGGTGAATTCAATGAATATTACATTAGTGACAGTGTTAGTAGGTCTGCTCAACTGTGGAATGAACAGAGGAAGTTGATACTGCATGATGCAATCTTTCGCTTTCTTTTACCATCAATGGAAAAAGAGGCTAGAGCATACCTGACAAGCAAAGCAAAAAACTGGTTACTTATGGAGTATGGCAAGGCCTTGTGGAATAAGGTTTCTTTGGGACCTTATCAACGGAAAGATAATGATCTTGGTTCTGATGATGAAGCTGCCCCTAGAGTTATGGCTTGCTGTTGGGGTCCTGGAAAGCCACAAACAACTTTTGTAATGTTAGATTCATCAGGAGAAGTGCTAGATGTGCTTTATACGGGGTCCCTTACGTTACGGTCCCAGAATGTTAATGATCAACAACGGAAGAAAAATGACCAAGAACGTGTGTTGAAGTTCATGACAGACCACCAACCGCACGTTGTTGTTCTAGGAGCTGTGAATTTGTCTTGTACTCGTTTGAAAGATGATATATACGAGATCATTTTTAAAATGGTGGAGGAAAATCCCAGAGATGTTGGGCATGAGATGGATGGCCTCAGTATTGTGTATGGGGACGAATCTCTTCCCCATCTGTATGAAAATTCTCGAATTTCCTCTGAACAACTCCCTTCACAGCAAGGCATAGTGAGGCGGGCTGTGGCTCTTGGTCGGTATCTGCAGAATCCCTTGGCAATGGTCGCGACACTCTGTGGGCCTAGAAAAGAAATATTATCTTGGAAACTGAGTTCCCTTGAGAGCTTTCTCAATCCTGATGAGAAATTTGGGATGGTAGAGCAGATTATGGTTGATGTGACCAATCAGGTGGGCCTAGACATTAATTTAGCCATAAGTCACGAGTGGCTATTTGCTCCCTTACAGTTTATTTCCGGGCTTGGTCCAAGAAAGGCTGCATCCTTACAGAGGTCCCTGGTACGAGCTGGAGCAATTTTTACAAGGAAGGACTTTGTGACAGAACATAAATTGGGTAAAAAGGTTTTTGTCAATGCAGTAGGTTTCTTGCGTATTCGGAGGAGTGGATTGGCTTCTAGCAGCAGCCAGTTTATTGATTTGCTGGATGATACTAGGATTCATCCAGAATCATATACTCTTGCACAAGAGTTAGCTAAAGATGTCTATGAGGCAGATGGCACAGGTGATGCCAATGACGATGACGATGCACTGGAGATGGCTATAGAGCATGTGCGAGACAGGCCTAGTTACTTGAAAAACCTTGATGTTGAGGAATATGCAGGAGAGAAGAAGCGGACTAACAAAATAGAAACTTTCTATGACATTAAAAGAGAATTGATTCAGGGATTTCAGGATTGGCGTAAACAGTATGAAGAACCAAATCAGGATGAGGAGTTCTATATGATTTCTGGTGAAACTGAGGAGACCCTTGCAGAGGGGAAAATTGTCCAAGCTACAATTCGCAGAGTGCAAGCCCAAAAGGCAATATGTGCACTTGAATCTGGCTTAACTGGAATCCTCATGAAAGAAGACTACACAGATGACTGGAGGGATTTAGTTGAGCTATCTGACAGGCTGCATGAAGGCGATATTCTCACCtgcaaaatcaaatcaattcagAAGAATAGATATCAAGTATTCCTTGTTTGCAGGGAGAGTGAAATGAGAAGTAATCGTCTCCAGAATAATCGTAATCTTGACCCCTATTACCATGAAGACCGAAGCTGTCTACAGAGTGAACAAGACAAAGCTCGCAAAGAAAAAGAGCTTGCAAAGAAGCATTTCAAGCCAAGAATGATAGTTCATCCACGATTCCAGAACATAACagctgatgaagcaatggagTTCTTGGCAGACAAGGATTTTGGAGAAAGTATCATACGGCCTAGTTCACGTGGACCTAAATTTCTTACTTTAACTCTCAAAATCTATGATGGAGTTTATGCCCACAAAGATATAATTGAAGGTGGAAAGGAACACAAGGACATTACAAGCTTGCTTCGAATTGGGAAGACACTAAAAATTGGAGAGGACACTTTTGAGGATTTAGATGAGGTAATGGATCGTTATGTTGATCCCTTGGTGACTCACTTAAAGGCAATGTTAAATTATCGCAAGTTCAGGAAGGGTACAAAAGCAGAAGTTGATGAACTTCTGAGGATGGAGAAAGCAGAATATCCTATGCGGATAGTCTATAGCTTTGGCATCTCTCACGAACATCCTGGCACATTCATATTAACTTATATAAGGAGTACAAATCCACACCATGAGTACATTGGCCTTTATCCGAAAGGATTCAAGTTTCGAAAAAGGATGTTTGAGGACATTGATCGGCTTGTGGCATATTTTCAGAGGCATATTGATGATCCACAGCATGATTTAGCCCCCTCCATTAGATCTGTTGCTGCTATGGTGCCAATGCGAAGCCCTGCCACTGGTGATTCATCTGGTGCATCTGTGGGTAGTGGCTGGGGTGGGTCTAGCAATGAGGGTGGCTGGAGAAGTCACTCTGGTGATAGGGATCGATCTACTCCGGGTTCCAGGACAGGGCGAACTGATTACAGAAATAGTGGAAATCGAGATGACCACCCTAGTGGGTTGCCTCGTCCATACAGTGGTGGACGTGGACGCGGTCGAGGCTCATATAACAGTCGAGGAAACAGCTCTAATAATGAAAGACAGGAGTCTGGTTATGGTGCTGGTAGATGGGGTTCGGGTGtgaaggaaggagatgatggtTTAAGCAAATTTCCAGGTGCTAAGGTTCAAAATTCGCCAGGAAGGGAAGCTTTTCCTGGTGGTTGGGGTGGTGGAGGCAGTGCCAATGACAATACTGGCTGGGGACATGGAGCTGATGATAGTGAGCGAGGAAGCTCTGGCTGGGGAAGTGGTCCCAAGAAATCTGATAATGGATGGTCTGGAAATGCTGGTGGGGGCTCCGGTTGGTGA 5898 0.4395 MVLEGKVVSGSGMFRFPPVPPLLCCRNTEASSSDLLLPLASLARRLPSLQSLVAVDASCANLKVPPVKSATSGSRVRMAPMFRPPRRSPELFFHVFFSHPPHHLRYLANAQASPSMASQKTPAKSSPVTFLLASFLISSCSTSVVVDTETPTASGSVGMFAGSKFQPAPWSISSIIAPKSDSFITTTIIAPGAVATIYNKRPNSAMKTAKVIVADQAEVEDAYLSRVSTGNSAVAAISRRICVASTTFIATDGSLKLSIVDHSSSSPLHEARRVVMVAFVGVGFTIPYAGAVGFKPSNDIAGVWAGRVSWSMSLSLPDHHPPAATKSLQKLMLVYEIWRYDNLEVARLSSLRFVALPPTVNYGQRRSLGRRRRALEISQFLFAFYEVEFEEDEREPADGDGLDMDDEDEDEEEGMNWGNSLNPVEEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKKGQRDTEDEPSGLSDEEEFVGSGKGGRTAEEKLKLSLFGDDEGAPLEDIAEEEEQGEEEEDADIGEEDEMADFIVDEEEVDEHGAPMRRRKLKRKKTRQAPGVSSSALQEAQELFGDVDELLQSRKQSLQSRENRETRLEDEFEPIVLSEKYMTEKDDRIREIDIPERMQVSEESTGAHPDASSIGEESNWIHEQLKKGTVPGIHKDDKGNIPIDSNDIVRFLELHHVQKLDIPFIAMYRKEECLSLLKNPQQPGMDENFDKNEKTPTLKWHNVLWAVHDLDRKWLLLQKRKSALQAYYNKRFEEESRRVYDETRLELNHQLFESVMRSLKAAETEREVDDVDSKFNLHFPPGEVGVDEGQYKRPKRKSAYSSFSKAGLWEVASKFGRSSERLGMILSLEELEEIMTELEDPKETPEEMASNFTCAMFDTPQEVLKCARHMAAVEISCEPSIRKHVRANFIDHAVVSTCPTADGNVTIDSFHQFAGIKWLREKPLSKFEDAQWLLVQKAEEEKLLQVTIKLPEEYLDKLTGEFNEYYISDSVSRSAQLWNEQRKLILHDAIFRFLLPSMEKEARAYLTSKAKNWLLMEYGKALWNKVSLGPYQRKDNDLGSDDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPHLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPRKEILSWKLSSLESFLNPDEKFGMVEQIMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTEHKLGKKVFVNAVGFLRIRRSGLASSSSQFIDLLDDTRIHPESYTLAQELAKDVYEADGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYAGEKKRTNKIETFYDIKRELIQGFQDWRKQYEEPNQDEEFYMISGETEETLAEGKIVQATIRRVQAQKAICALESGLTGILMKEDYTDDWRDLVELSDRLHEGDILTCKIKSIQKNRYQVFLVCRESEMRSNRLQNNRNLDPYYHEDRSCLQSEQDKARKEKELAKKHFKPRMIVHPRFQNITADEAMEFLADKDFGESIIRPSSRGPKFLTLTLKIYDGVYAHKDIIEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKAMLNYRKFRKGTKAEVDELLRMEKAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDLAPSIRSVAAMVPMRSPATGDSSGASVGSGWGGSSNEGGWRSHSGDRDRSTPGSRTGRTDYRNSGNRDDHPSGLPRPYSGGRGRGRGSYNSRGNSSNNERQESGYGAGRWGSGVKEGDDGLSKFPGAKVQNSPGREAFPGGWGGGGSANDNTGWGHGADDSERGSSGWGSGPKKSDNGWSGNAGGGSGW 1965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1449 1965 MobiDBLite consensus disorder prediction 391 415 - -
Sto8g1449 1965 MobiDBLite consensus disorder prediction 456 567 - -
Sto8g1449 1965 ProSiteProfiles S1 domain profile. 1463 1534 IPR003029 GO:0003676
Sto8g1449 1965 Gene3D SH2 domain 1683 1777 IPR036860 -
Sto8g1449 1965 SUPERFAMILY RuvA domain 2-like 1349 1438 IPR010994 -
Sto8g1449 1965 CDD SH2_Nterm_SPT6_like 1585 1673 IPR035019 -
Sto8g1449 1965 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 425 1959 - -
Sto8g1449 1965 SUPERFAMILY Nucleic acid-binding proteins 1458 1538 IPR012340 -
Sto8g1449 1965 Pfam HHH domain 1350 1437 IPR041692 -
Sto8g1449 1965 Gene3D - 828 1268 IPR023323 -
Sto8g1449 1965 MobiDBLite consensus disorder prediction 478 496 - -
Sto8g1449 1965 SUPERFAMILY Ribonuclease H-like 1075 1230 IPR012337 -
Sto8g1449 1965 MobiDBLite consensus disorder prediction 1817 1845 - -
Sto8g1449 1965 SUPERFAMILY Tex N-terminal region-like 670 1054 - -
Sto8g1449 1965 MobiDBLite consensus disorder prediction 1864 1879 - -
Sto8g1449 1965 Pfam SH2 domain 1552 1769 IPR035420 -
Sto8g1449 1965 SUPERFAMILY RuvA domain 2-like 1246 1336 IPR010994 -
Sto8g1449 1965 SMART rnase_8s 1075 1193 IPR006641 GO:0006139
Sto8g1449 1965 MobiDBLite consensus disorder prediction 391 423 - -
Sto8g1449 1965 Gene3D - 634 827 IPR023319 -
Sto8g1449 1965 Gene3D - 1456 1543 IPR012340 -
Sto8g1449 1965 MobiDBLite consensus disorder prediction 1791 1965 - -
Sto8g1449 1965 Gene3D - 601 1338 - -
Sto8g1449 1965 SUPERFAMILY SH2 domain 1588 1674 IPR036860 -
Sto8g1449 1965 Gene3D SH2 domain 1571 1682 IPR036860 -
Sto8g1449 1965 Pfam Helix-hairpin-helix motif 1234 1335 IPR032706 -
Sto8g1449 1965 Gene3D - 1344 1436 IPR042066 -
Sto8g1449 1965 Pfam Holliday-junction resolvase-like of SPT6 1074 1230 IPR028231 -
Sto8g1449 1965 MobiDBLite consensus disorder prediction 1795 1816 - -
Sto8g1449 1965 MobiDBLite consensus disorder prediction 1944 1965 - -
Sto8g1449 1965 Gene3D - 1065 1455 IPR037027 GO:0006139
Sto8g1449 1965 MobiDBLite consensus disorder prediction 502 537 - -
Sto8g1449 1965 SMART S1_6 1461 1534 IPR022967 -
Sto8g1449 1965 CDD SH2_Cterm_SPT6_like 1684 1770 IPR035018 -
Sto8g1449 1965 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 425 1959 IPR017072 GO:0032968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1449 Sto-Chr8 9257462 9273541 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1449 K11292 - gmx:100808591 2537.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1449 8 9257462 9273541 Sto8g1449 8 9257462 9273541 ECH