Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1435 ATGGATTCCTCATCTGCTTCCGTTGATGCCTGTACCGGATTCAAGGATAAGGAGTCAATGGTTGACCCCTTCTTGGTTGAGGCTCTCCAGAACTCTCGTCACCGTCTCACCATTTTGCGTATGGAACTTGATATCCAGAAGTTTCTGAATAATGCTGATCAACAGCATTTTGAGTTCCAACACTTCCCTTCTTCATATCTCCGACTGGCAGCGCATCGTGTTGCTCAACACTATGGTATGCAAACGATGATTCAAGATATTGGCATAGATGGCCAAGGAAGTAAAATACTGGTGAGAAAGTTAGCAGAGAGCAGGTATCCAGTGGTCTGCTTGTCTGAAATACCTGCCAAACAGCTAGAAAATGACAAACCTGAGCATATAAAAATTGCCATAAGGCCTAGGCCTAACAAAAGCAATGTAAGTGAAGTCAATGGGGCAGGACTCAAAGGAAATCCTCTTAGAAGTGTGGAAGAGAGAAAGGAGGAATATGATCGGGCACGAGCACGCATATTTAGTAGCTCTAGAAGTCCTGATTCAGGTGACACATTGTCCCAGGTCCCAATGGATGGGAAAAATTGCAGTGTGAGCAAGGATGAAAATGAAGCCGGAAAGAATCCTATGGTTGATCCAGAAAAATGCACCAGCATCAAGGATATTAGTTCTACACGTGTTGCCATCTTAAGAGATAGGGAGAAGGATCGTAGTGATCCAGATTATGATCGTAGCTATGGAAGTATTCTGAACTCTGGCCCTAACTTGGTGCCTTTTACTCTGCACAAAGTTCAACCTTCATTTGCTCAATATGACAGTACTTTTAATCAGCTGGGTCAGATGTCACAAACTCATGCTTCACTTGGCTATGGACCACCGTCAAGCCCAATAATGAATCCTTTTTGTGCCACAGGATTGAACCAGACTCCTGGAGATGTTACCTACCTACAGTGGCCAAGTGCTGCTATGATGTATGCACATTCATATGACCAATTTCGACATGCTGTTTTTCAGGCTCCATTTGGTCAACAGCCGTTGAGCTTTGACTATCCGCAGAACTACTAG 1056 0.4403 MDSSSASVDACTGFKDKESMVDPFLVEALQNSRHRLTILRMELDIQKFLNNADQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMIQDIGIDGQGSKILVRKLAESRYPVVCLSEIPAKQLENDKPEHIKIAIRPRPNKSNVSEVNGAGLKGNPLRSVEERKEEYDRARARIFSSSRSPDSGDTLSQVPMDGKNCSVSKDENEAGKNPMVDPEKCTSIKDISSTRVAILRDREKDRSDPDYDRSYGSILNSGPNLVPFTLHKVQPSFAQYDSTFNQLGQMSQTHASLGYGPPSSPIMNPFCATGLNQTPGDVTYLQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYPQNY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1435 351 SMART R3H_4 19 101 IPR001374 GO:0003676
Sto8g1435 351 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 5 350 - -
Sto8g1435 351 MobiDBLite consensus disorder prediction 172 191 - -
Sto8g1435 351 PANTHER OS05G0411600 PROTEIN 5 350 - -
Sto8g1435 351 SUPERFAMILY R3H domain 13 137 IPR036867 GO:0003676
Sto8g1435 351 CDD R3H_encore_like 34 100 - -
Sto8g1435 351 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Sto8g1435 351 Pfam R3H domain 37 86 IPR001374 GO:0003676
Sto8g1435 351 MobiDBLite consensus disorder prediction 153 171 - -
Sto8g1435 351 MobiDBLite consensus disorder prediction 134 212 - -
Sto8g1435 351 Gene3D - 12 133 IPR036867 GO:0003676
Sto8g1435 351 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Sto8g1435 351 Pfam SUZ domain 128 174 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1435 Sto-Chr8 9168885 9172631 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1435 - - gmx:100796710 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1435 8 9168885 9172631 Sto8g1435 8 9168885 9172631 ECH