Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1396 ATggagagagaaggagagggTGTGGAGGGAAATGGGGAGGAACTCGGGAGGTGCCTCAGCAGCTATGTGGACGAAGGCAGCCCCGACAGCCACAGATACTACCTGTCGCGACGCACAGTGCTTGAGATGCTCAAAGACAGAGgctattccattcccacttctGAAATCGACCTCTCTCTCTCCGATTTCCGAGCCATTCACGGTCAATCCCTCGACGTTGAAAAACTCCGCTTCTCTGCCACTCATGCCTCTGACGCCTCCAAGCGGATTTTGGTGGTCTTCTGCTGGCCTGGTATTGTCAAAGTTAATGTCATCCGGAGTCTTGCAGCTCTGATTGTTAATAAAGACACTTTAACTGGGATGATATTGATAGTGCAGAGTCATGTTACTAGCCAGGCCTTGAAAGCTATAGATCTTTTCACATTCAAGGTTGAAGTATTCCAGATCACAGATTTAATTGTTAATATCACAAAACATGTATTGAAGCCAAAACATCAGGTGCTAACTGATCGGCAGAAACAAAATCTTCTGAAGAAATACAATATAGAAGAAAAGCAGCTTCCCCGCATGCTACAGAAAGATGCAATCGCACGATACTATGGACTTGAGAGGGGACAAGTGGTTAAAGTTACCTATGATGGTGATATCACCCAGATGCATGTGACATACAGATGTGTTTGGTGA 684 0.4284 MEREGEGVEGNGEELGRCLSSYVDEGSPDSHRYYLSRRTVLEMLKDRGYSIPTSEIDLSLSDFRAIHGQSLDVEKLRFSATHASDASKRILVVFCWPGIVKVNVIRSLAALIVNKDTLTGMILIVQSHVTSQALKAIDLFTFKVEVFQITDLIVNITKHVLKPKHQVLTDRQKQNLLKKYNIEEKQLPRMLQKDAIARYYGLERGQVVKVTYDGDITQMHVTYRCVW 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1396 227 Gene3D - 24 151 IPR036710 GO:0003677|GO:0003899|GO:0006351
Sto8g1396 227 PIRSF RPB5 22 227 IPR014381 -
Sto8g1396 227 SUPERFAMILY RPB5-like RNA polymerase subunit 152 227 IPR035913 -
Sto8g1396 227 Pfam RNA polymerase Rpb5, C-terminal domain 154 226 IPR000783 GO:0003677|GO:0003899|GO:0006351
Sto8g1396 227 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 29 155 IPR036710 GO:0003677|GO:0003899|GO:0006351
Sto8g1396 227 Gene3D - 152 227 IPR035913 -
Sto8g1396 227 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 7 227 IPR014381 -
Sto8g1396 227 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 7 227 - -
Sto8g1396 227 Pfam RNA polymerase Rpb5, N-terminal domain 29 109 IPR005571 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1396 Sto-Chr8 8910281 8913785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1396 K03013 - gmx:100306033 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1396 8 8910281 8913785 Sto8g1396 8 8910281 8913785 ECH