Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1392 ATGGTTTCATCTTCAATCTCTCTCAGGCCTATCATTCCTTCTGTCGCCGTTGATTTACATAGTAAGAACACAACTGCTGGAATTACGTGGGAGAGCTTGGGATTTAACAAGTCAGGCTATTCAAAGTCAAACCGACTGATATCTGCAAAGGAATTTAAATTGAATTGTTCAAACGATAGAGAGATGGATGTGAGCACTTCGGCTTTGGTGGACAATGTTGCAGAGTGCTTATATGCAGAAGAGGAGATCAGAGAGCCTAGTATATCAACAACACTGATGAATTTTGATAATGAATTTGATCCGTATGGAGCAGTCAGTACGCCACTTTACCAAACTGCTACTTTTAAGCAGCCTTCTGCAATAGAAAATGGTCCTTACGACTATACCAGAAGTGGAAATCCCACTCGAGATGCTTTGGAAAGGTTACTAGCAAAGCTTGACAAAGCAGATAGAGCCTTTTGCTTCACCAGTGGAATGGCTGCTTTAACTGCTGTTACTAATCTTGTTGGAACTGGTCAGGAAATTGTTGCTGGGGATGATCTCTATGGGGGCACTGATAGATTGCTGTCCCAAGTAATTCCAAAGACTGGAGTTCTAGTGAAAAGAGTAAATACAGCTGATCTAGATGAGGTTGCCTCTGCTATTGGACCTTGGACTAAGCTTGTGTGGCTGGAGAGTCCCACCAATCCCCGACTACAAATTTCTGATATTCGAAAAATTGTGGAGATGGCTCATGCACATGGTGCTCTTGTATTGGTGGACAATAGTATAATGTCGCCTGTGTTGTCCCAGCCTTTGGAACTTGGAGcagaTATTGTTATGCATTCGGCTACCAAATTTATTTCCGGACATAGTGATATCATGGCTGGTGTTCTTGCTGTGAAAGGTGAAAGGTTGGCAAAAGAAGTGTATTTCTTACAAAATGCACAGGGTTCAGGCTTAGCTCCATTTGACTGTTGGCTTTGTTTGCGAGGAGTCAAGACAATGGCCCTGCGAGTTGAAAAGCAACAGGAGAATGCACAAAAGATTGCTGAGTTTCTTGCCTCCCACCCTCGAGTAAAGAAAGTAAACTATGCTGGTCTTCCTGGTCATCCAGGACATGACTTACACTACTCTCAAGCAAAAGGTGCAGGATCTGTGCTTAGCTTTTTGACAGGTTCACTAGCACTCTCAAAGCATATTGTTGAAACTACCAAGTACTTCAGCATAACTGTCAGTTTTGGGAGTGTAAAGTCCCTCATAAGCTTGCCTTGCTTTATGTCCCATGCCAGCATACCTGCTTCAGTCCGTGAAGCCAGAGGTTTAACTGAAGATCTTGTGCGTATTTCTGTGGGGATTGAGGATGTTAATGATCTTACTGCGGATCTTGACAATGCTCTTAGATCTGGCCCTCTCTAA 1398 0.4306 MVSSSISLRPIIPSVAVDLHSKNTTAGITWESLGFNKSGYSKSNRLISAKEFKLNCSNDREMDVSTSALVDNVAECLYAEEEIREPSISTTLMNFDNEFDPYGAVSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALERLLAKLDKADRAFCFTSGMAALTAVTNLVGTGQEIVAGDDLYGGTDRLLSQVIPKTGVLVKRVNTADLDEVASAIGPWTKLVWLESPTNPRLQISDIRKIVEMAHAHGALVLVDNSIMSPVLSQPLELGADIVMHSATKFISGHSDIMAGVLAVKGERLAKEVYFLQNAQGSGLAPFDCWLCLRGVKTMALRVEKQQENAQKIAEFLASHPRVKKVNYAGLPGHPGHDLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFSITVSFGSVKSLISLPCFMSHASIPASVREARGLTEDLVRISVGIEDVNDLTADLDNALRSGPL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1392 465 Gene3D - 87 329 IPR015421 GO:0003824
Sto8g1392 465 PIRSF CGS 79 463 IPR000277 GO:0019346|GO:0030170
Sto8g1392 465 SUPERFAMILY PLP-dependent transferases 94 461 IPR015424 -
Sto8g1392 465 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 89 462 IPR006238 GO:0004121|GO:0071266
Sto8g1392 465 Pfam Cys/Met metabolism PLP-dependent enzyme 90 460 IPR000277 GO:0019346|GO:0030170
Sto8g1392 465 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 29 465 IPR000277 GO:0019346|GO:0030170
Sto8g1392 465 Gene3D Aspartate Aminotransferase, domain 1 330 463 IPR015422 GO:0003824
Sto8g1392 465 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 271 285 IPR000277 GO:0019346|GO:0030170
Sto8g1392 465 CDD CGS_like 103 461 IPR000277 GO:0019346|GO:0030170
Sto8g1392 465 PANTHER BNAC04G24570D PROTEIN 29 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1392 Sto-Chr8 8894600 8900816 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1392 K01760 - qsu:112033477 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1392 8 8894600 8900816 Sto8g1392 8 8894600 8900816 ECH