Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1356 ATGAAGCTCATCAATATTAACGCCAAAAACCTCAGCCCCAAACGCCTATTTCGTTCCAAGAAGGAACGCTCCGTCGTCTCCAGATCCGATCCCTCTTCCTTCAGCTCCGGAACATCGTCTTCTTCCTCTGACGGCTCCATCCACAAGCCCCTACCCGGCGCCGCCGGCTCCACGACTCCCACTAGTGTTTTGCCTGAGATTTCCGGCGACTGGTCCGATATCTCCGCCGAAATTCCCACCGATTTGGGTTTGGCTCAGGCGTTCAAGCTGATAGACCGAGATAATGACGGCATCATCTCGCGGGAGGAACTCGGAGCGTTGCTGTCTCGTCTCGGTGCTCAGCCGCCGAGCCAGGAGGAGGTTGCGATGATGCTCAGCGAGGTGGATCACGACGGCCGGGGATGCATCCGCGTGGAAGCGCTCATGAGCCGGGTCGGACCGGGGCCCGACTCCGACGACTTGAGAGAGGCGTTCGAGGTTTTTGACACGGATCACGACGGGAGAATCTCGGCGGAGGAGCTCTTGAGGGTTTTCAAGGCTATCGGCGATGAGCGGTGCACGTTAGAGGAATGCCGGCGCATGATAGAAGGTGTGGATAGGAGTGGGGATGGGTTTGTGTGCTTCGAGGACTTTTCTCGTATGATGGAGCTGCATCAATGA 660 0.5758 MKLININAKNLSPKRLFRSKKERSVVSRSDPSSFSSGTSSSSSDGSIHKPLPGAAGSTTPTSVLPEISGDWSDISAEIPTDLGLAQAFKLIDRDNDGIISREELGALLSRLGAQPPSQEEVAMMLSEVDHDGRGCIRVEALMSRVGPGPDSDDLREAFEVFDTDHDGRISAEELLRVFKAIGDERCTLEECRRMIEGVDRSGDGFVCFEDFSRMMELHQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1356 219 Pfam EF-hand domain pair 153 215 IPR002048 GO:0005509
Sto8g1356 219 Pfam EF-hand domain pair 84 138 IPR002048 GO:0005509
Sto8g1356 219 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 7 217 - -
Sto8g1356 219 MobiDBLite consensus disorder prediction 28 47 - -
Sto8g1356 219 ProSiteProfiles EF-hand calcium-binding domain profile. 79 114 IPR002048 GO:0005509
Sto8g1356 219 Gene3D - 142 219 - -
Sto8g1356 219 ProSitePatterns EF-hand calcium-binding domain. 162 174 IPR018247 -
Sto8g1356 219 SMART efh_1 190 218 IPR002048 GO:0005509
Sto8g1356 219 SMART efh_1 83 111 IPR002048 GO:0005509
Sto8g1356 219 SMART efh_1 153 181 IPR002048 GO:0005509
Sto8g1356 219 PANTHER CALCIUM-BINDING PROTEIN CML35-RELATED 7 217 - -
Sto8g1356 219 MobiDBLite consensus disorder prediction 15 66 - -
Sto8g1356 219 ProSiteProfiles EF-hand calcium-binding domain profile. 186 219 IPR002048 GO:0005509
Sto8g1356 219 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Sto8g1356 219 ProSitePatterns EF-hand calcium-binding domain. 92 104 IPR018247 -
Sto8g1356 219 CDD EFh 153 215 IPR002048 GO:0005509
Sto8g1356 219 Gene3D - 83 141 - -
Sto8g1356 219 SUPERFAMILY EF-hand 83 216 IPR011992 -
Sto8g1356 219 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1356 Sto-Chr8 8661098 8661757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1356 10 219 EF-hand Containing Proteins AT3G10190 53.052 6.75e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1356 K13448 - fve:101298441 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1356 8 8661098 8661757 Sto8g1356 8 8661098 8661757 ECH