Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1342 ATGGTTTCACAGCCTTCTTGTGTTATTTATGAACACATCATGAAGGTTCTATTTGTCAAATTCCTATTCATACTAATGACCCTTAAGTACTACAACCACTCTGTAATTCCCACCAAAACACTTCCAAATTCCCACCACATCCTTTCATCATTCCAAAAACTTCCTCTTGATGGCCACTTGAGCTTAGAAACCACcaataataattacaaaaatgGACATGCAAGCAAGGATTTTGGCAACATATACCATTACCCTCCTCTGGCAGTTCTGCATCCAAAAACAGTTTCTGATATCTCAATGACCATAAAGCAAGTCTTTGAAATGGACTCACCAAAACTAAAGGTTGCAGCGAGAGGCCATGGACACTCCCTACAAGGTCAGGCTCAGGCACACCAAGGGCTAGTTGTGAATATGGAATCACTGCAAGAAATGGGAATGGTGGTGCATAGTGGTTATGTGGATGTTTCAGGTGGTGAGTTGTGGATAAATGTTCTGCATGAGACTCTGAAACATGGGTTGGCTCCCAAGTCTTGGACTGATTATCTTCATCTTAGTGTTGGGGGAACTCTGTCTAATGCTGGAATAAGTGGGCAAGCCTTCAGGCATGGACCCCAGATCAATAATATCTTACAGCTCCAAGTAGTCACagGAAAAGGAGATGTGGTAACCTGTTCAGAGAACCAAAATGCAGACCTTTTCTATGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATCACCAAAGCTAGAATTTCTCTGGAACCAGCACCAATGAAAGTGAAATGGATTAGAATGCTGTACTCAGAATTCTCCATATTTGCAAGGGATCAAGAGCACTTGATATCACTTGAGGATACATTTGATTATATTGAAGGGTTTGTGATCATAAATAGAACTGGCATCCTTAATAACTGGAGGTCATCATTCAACCCCAAAGACCCAATTCTAGCCACCCAATTTGATTCAGATATTGGGAAGACATTCTACTGTCTTGAGGTAGCAAAATACTTCAACCCAGATCAAAAAGAAGCCATGAATGAGAGTGTTGAGCAAGTGTTGTCAGAACTGAGGTATATTCCATCCACACTCTTCCAATCAGAAGTTTCTTACGTGGATTTCCTGGACAGAGTGCATGTTTCTGAGATGAAGCTAAGGGAAAAAGGCTTGTGGGAAGTTCCCCATCCTTGGCTCAATCTTCTCATCCCAAGAACCAGAATTCATGAGTTTGCACATCAGGTGTTTCACAAAATTCTTGTGGATACCAGCAATGGCCCCATACTCATATACCCCGTCAACCAATCAAGGTGGAACAATAAAACATCATTGGTAACTCCAGAGGAAGATGTGTTCTACCTGGTGGCATTGCTTTCATCTGCAGTGCCGTATTCGAGAGGGAAAGACAGCTTAGAATACATTATGAGGCAACACAGAAGAATAATAGAATTCTGCGAGCGTACGAAAATGGGAGTGAACCAATATCTTCCCCATTATACAAGCAGAGAAGAATGGGAAGAGCACTTTGGGATTTCTAGGTGGGAAGTAATGGTACGAAGAAAATCACAGTATGACCCAATGGCTCTTCTTGCCCCTGGCCACAgaatctttcaaaacccaatGCTTAGCTCTACTGAGTCATGTgattaa 1644 0.413 MVSQPSCVIYEHIMKVLFVKFLFILMTLKYYNHSVIPTKTLPNSHHILSSFQKLPLDGHLSLETTNNNYKNGHASKDFGNIYHYPPLAVLHPKTVSDISMTIKQVFEMDSPKLKVAARGHGHSLQGQAQAHQGLVVNMESLQEMGMVVHSGYVDVSGGELWINVLHETLKHGLAPKSWTDYLHLSVGGTLSNAGISGQAFRHGPQINNILQLQVVTGKGDVVTCSENQNADLFYGVLGGLGQFGIITKARISLEPAPMKVKWIRMLYSEFSIFARDQEHLISLEDTFDYIEGFVIINRTGILNNWRSSFNPKDPILATQFDSDIGKTFYCLEVAKYFNPDQKEAMNESVEQVLSELRYIPSTLFQSEVSYVDFLDRVHVSEMKLREKGLWEVPHPWLNLLIPRTRIHEFAHQVFHKILVDTSNGPILIYPVNQSRWNNKTSLVTPEEDVFYLVALLSSAVPYSRGKDSLEYIMRQHRRIIEFCERTKMGVNQYLPHYTSREEWEEHFGISRWEVMVRRKSQYDPMALLAPGHRIFQNPMLSSTESCD 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1342 547 SUPERFAMILY FAD-linked oxidases, C-terminal domain 259 535 IPR016164 GO:0003824|GO:0050660
Sto8g1342 547 Gene3D - 138 258 IPR016169 -
Sto8g1342 547 SUPERFAMILY FAD-binding/transporter-associated domain-like 73 255 IPR036318 GO:0050660
Sto8g1342 547 PANTHER GULONOLACTONE OXIDASE 34 539 - -
Sto8g1342 547 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 257 535 IPR015345 GO:0009690|GO:0019139|GO:0050660
Sto8g1342 547 Pfam FAD binding domain 86 225 IPR006094 GO:0050660
Sto8g1342 547 ProSiteProfiles PCMH-type FAD-binding domain profile. 82 256 IPR016166 GO:0071949
Sto8g1342 547 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 86 122 IPR006093 GO:0016491
Sto8g1342 547 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 34 539 - -
Sto8g1342 547 Gene3D - 73 535 IPR016167 -
Sto8g1342 547 Gene3D - 259 493 IPR016170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1342 Sto-Chr8 8553279 8555972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1342 K00279 - gmx:100777568 760.755