Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1288 ATGTCTTCAATCTCATCCCTCACCGTTGATCCCTATACTGTCTCCTTCTCTCGCAGGGCCTTCGAATTCCACACTAGACCCTTTCTTCCTCGCCGGAGCGTCGCTCTCTGCTCTGCCAAGCCCCTAGTATCCTCCTCTTCCGAGCTCACCGTGTCTGATTCCTCCACCCTCGATGGGTTGAGTCGAATCGAGAGTCTCAGTCAGGTTTCCGGTGTTTTGGGTTGCCAATGGGGCGATGAAGGCAAAGGGAAACTCGTTGATATCCTAGCCCAGCACTTTGATATCGTTGCTCGTTGTCAGGGTGGAGCTAATGCTGGGCATACCATTTATAATGCTGAAGGAAAAAAGTTTGCTCTTCATCTTGTTCCTTCAGGTATCCTCAATGAGGATACGTTGTGTGTTATTGGTAATGGGGTTGTAGTGCATCTTCCAGGgctttttaaagaaattgatgGCCTAGAATCCAAAGGGATCTCGTGCAAGGGCAGGATATTGATATCTGATCGCGCTCACTTGTTGTTTGATTTCCACCAAGTTGTGGATGGGCTAAGAGAGGCTGAGCTTGCTAAATCTTTCATTGGCACTACCAGGAGAGGCATTGGACCTTGCTATTCCAGCAAGGTTATCCGGAATGGAATTAGAGTAAGTGACTTGAAGCACATGGATACATTTCCTCACAAGCTTGATCTTTTGTTATCAGATGCAGCATTAAGATTCAAAGATTTTAACTATGGTCCGGACATGCTCAGGGAAGAAGTTGAAAAGTACAAGAGATTCGCTGAGAGATTGGAACCCTTTATTGCTGATACTGTACATGTCATGAATGAAGCTATAACACAAAAGAAGAAGATTTTGGTTGAAGGAGGTCAAGCAACCATGTTGGACATTGATTTTGGAACTTATCCCTTTGTAACTTCATCTAGTCCATCAGCAGGTGGGATTTGTACTGGTCTAGGTATTGCTCCAAGAGTGGTTGGTGATATAATTGGTGTGGTTAAAGCGTACACTACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAGACTTGGGTCAAGAGGGTGATCTCCTCAGATTTGCCGGGCAGGAGTTTGGCACAACTACTGGTCGTCCAAGACGCTGTGAATTTACTGAAATTCAGTTGGGTGTCTCATATAAATATGTTGATGGTACTCCAATCAAATCATTCCCTTCAGATCTCCGTCTTCTGGACCAATTGAAGGTTGATTATGAAGTACTTCCCGGTTGGAAGTGTGACATTTCTTCCATCAGAAACTATTCTGAGCTTCCTAGAGCTGCACAACAGTATGTGGAAAGGATAGAAGAACTTGTTGGTGTGCCAATTCACTACATTGGTGTGGGGCCTGGACGAGATGcactcatttataaataa 1389 0.4406 MSSISSLTVDPYTVSFSRRAFEFHTRPFLPRRSVALCSAKPLVSSSSELTVSDSSTLDGLSRIESLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFKEIDGLESKGISCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTRRGIGPCYSSKVIRNGIRVSDLKHMDTFPHKLDLLLSDAALRFKDFNYGPDMLREEVEKYKRFAERLEPFIADTVHVMNEAITQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDIIGVVKAYTTRVGSGPFPTEDLGQEGDLLRFAGQEFGTTTGRPRRCEFTEIQLGVSYKYVDGTPIKSFPSDLRLLDQLKVDYEVLPGWKCDISSIRNYSELPRAAQQYVERIEELVGVPIHYIGVGPGRDALIYK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1288 462 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 72 331 IPR042109 -
Sto8g1288 462 SMART adenylsucc_synt 69 461 IPR001114 GO:0000166|GO:0004019|GO:0006164
Sto8g1288 462 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 168 266 IPR042110 -
Sto8g1288 462 Pfam Adenylosuccinate synthetase 375 460 IPR001114 GO:0000166|GO:0004019|GO:0006164
Sto8g1288 462 Pfam Adenylosuccinate synthetase 72 373 IPR001114 GO:0000166|GO:0004019|GO:0006164
Sto8g1288 462 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 76 83 IPR018220 GO:0005525
Sto8g1288 462 Hamap Adenylosuccinate synthetase [purA]. 1 462 IPR001114 GO:0000166|GO:0004019|GO:0006164
Sto8g1288 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 461 IPR027417 -
Sto8g1288 462 ProSitePatterns Adenylosuccinate synthetase active site. 199 210 IPR033128 -
Sto8g1288 462 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 376 462 IPR042111 -
Sto8g1288 462 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 332 375 IPR042111 -
Sto8g1288 462 PANTHER ADENYLOSUCCINATE SYNTHETASE 30 378 IPR001114 GO:0000166|GO:0004019|GO:0006164
Sto8g1288 462 PANTHER ADENYLOSUCCINATE SYNTHETASE 375 462 IPR001114 GO:0000166|GO:0004019|GO:0006164
Sto8g1288 462 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 375 462 - -
Sto8g1288 462 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 30 378 - -
Sto8g1288 462 CDD AdSS 68 461 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1288 Sto-Chr8 8099045 8101873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1288 K01939 - gmx:100792329 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1288 8 8099045 8101873 Sto8g1288 8 8099045 8101873 ECH