Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1181 ATGGATAATGGACGAACTAGTGATTTAACTAATAAGAAATTCTCATGGAAAATTGAAAAGTTCTCGACATTGAGCCCTAAGAAGCTATACTCCCCGATTTTCACCGTCGGCGGTTATCCATGGAGGATTCTTGTGTTTCCAAATGGGAACAATATGGACTACTTGTCAATATATTTGGATGCTGCAGACGCTGCAAGGTTGCCTCGTGGCTGGAGCAGAAATGCAACTTTCACTTTGGCTATAATTAATCAAGTTGATAGCAAGATGACAGTCAAAAAAGTGGCTCGACACCAATTCAATGCAAGAGAGAATGACTGGGGTTTCACAGCATTTATGCCTCTGAGTGAACTCCGCAACCTTGGCAGCGGTTATGTTGTGAATGATACTTGTATCATTGATGCTGAGGTTTCCATTGACAAGTTTGGAAATCCGGATCAAGTAGATCAAGCCAATGGCATTACTGCATCTCAAATTTCTGGAGGTCAAGCTGGAAAAATGGAATTGGAGCCCCCACAGCAAGAAGATCGTGGGAAAGATGTAAATACTGTTCCACCACTTTCTCAACAAGTTAAAACTGATTCTTTACCCTCGGAAGTATCCTCAACACCAGGTGGTGAACTCGTGGATTTCAGGGGTCTATGGAAAATAGAAAAAGTATTTGTGCAACTACTAGAAGAAGTATGCTCCAAGCATCCATCTCTAATTGAATGTCAGCGGAAGAGAAGTCATCAGTTTATTGAATGGGCATTCACTGCCTTGGGCAGAGTTCTTCATTTCCTGAAGACAAAAAGGGTAAAAGACATGAACGAGGAGGCCTGTATGGATCTTAAAGTTTTATGGGAGGAACTCGAGacatttaaatttgatttgaCTTGGTTGGAGCCTCATGTTCAATCAGCCTTAGGCATGAAAAACTATCTGGAAAGGGCATTGCGGTTGAAAAAGTTGAAGGAGAACGTGGATGCTTCGGAGACAGAAATGAAGAAGCTTAAGGAAAAGCTGGCTGCTGCAAAAGTAGATCTTGAAACAGCAAGAAGAGACTTGATGCAAGCACTAGAAGGTTTTGAAGAAAGGGATATAGATGCTGAACTGGGATATGGGAGACCGTAA 1110 0.4153 MDNGRTSDLTNKKFSWKIEKFSTLSPKKLYSPIFTVGGYPWRILVFPNGNNMDYLSIYLDAADAARLPRGWSRNATFTLAIINQVDSKMTVKKVARHQFNARENDWGFTAFMPLSELRNLGSGYVVNDTCIIDAEVSIDKFGNPDQVDQANGITASQISGGQAGKMELEPPQQEDRGKDVNTVPPLSQQVKTDSLPSEVSSTPGGELVDFRGLWKIEKVFVQLLEEVCSKHPSLIECQRKRSHQFIEWAFTALGRVLHFLKTKRVKDMNEEACMDLKVLWEELETFKFDLTWLEPHVQSALGMKNYLERALRLKKLKENVDASETEMKKLKEKLAAAKVDLETARRDLMQALEGFEERDIDAELGYGRP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1181 369 Coils Coil 313 358 - -
Sto8g1181 369 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 10 349 - -
Sto8g1181 369 MobiDBLite consensus disorder prediction 182 201 - -
Sto8g1181 369 SUPERFAMILY TRAF domain-like 10 138 - -
Sto8g1181 369 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 148 IPR008974 GO:0005515
Sto8g1181 369 MobiDBLite consensus disorder prediction 156 203 - -
Sto8g1181 369 CDD MATH 13 136 IPR002083 GO:0005515
Sto8g1181 369 ProSiteProfiles MATH/TRAF domain profile. 11 136 IPR002083 GO:0005515
Sto8g1181 369 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 10 349 - -
Sto8g1181 369 Pfam MATH domain 18 138 IPR002083 GO:0005515
Sto8g1181 369 SMART math_3 16 117 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1181 Sto-Chr8 7476098 7481100 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1181 - - adu:107476101 370.163