Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1162 ATGGATTCTTTCCTCTATGCTCTctctttccttctcttcctttcccTTCTACCATTCCACACCGCATTGCCCCAGAaattcccttcttcttcttcttcttcaagctCCGGTCAGATTAACTCCAACTCCATTCTCGTCGCGCTTCTTGATTCCCACTATACTGAGCTCGCTGAGCTGGTGGAGAAAGCGCTTCTCTTACAGAAACTCGAGGACACCGTCGGCCTCCACAATATTACCATTTTCGCCCCCAGAAATGAAGCTTTGGAGCGCCAACTCGACCCCGAGTTCAAGCGGTTCCTCCTTGAGCCTCGCAATCTCAACTCCTTACAGACTCTCTTGATGTATCACATTGTTCCCAAACGAATTGGCTCCACCGATTGGCCCACTGCCAATTCTGGGCCTCTTCCGCACCGCACCTTGAGCGACCACCATGTGCATTTGACCACCAATGGGCCTGCCAAGAAAACCGTCGGCCTAGCTGAGATTGTTCGCCCCGACGACGTCGTTCGTCCCGACGGTGTCATTCACGGGATTGAGCGGCTCATGATTCCGCGATCGGTACAGGAGGATTTCAATCGCCGCCGCAATCTGCGGGACATCTCGGCGGTCATACCGGAGGGTGCGCCGGAGGTGGATCCAAGAACACACCGCTTGAAGAAACCCGCACCGGTACCCGCCGGGGCTCCGCCGGTGTTGCCAATTTACGACGCCATGGCACCGGGTCCCTCACTGGCTCCGGCGCCGGCGCCTGGTCCCGGTGGTCCTCACCACCACTTCAACGGCATGCGGCAGGTGAAAGACTTCATCCATACTCTGTTACATTACGGTGGTTACAATGAAATGGCAGATATTCTGGTGAACTTGACATCTTTAGCCACCGAAATGGGAAGGCTAGTGTCGGAAGGTTACGTGCTGACGGTGTTGGCTCCGAACGACGAGGCGATGGCGAAGCTAACGACGGACCAATTGAGTGAGCCGGGTGCGCCGGAGCAAATAATTTACTACCATATCATTCCGGAGTATCAGACGGAGGAGAGTATGTACAATGCTGTGAGGAGGTTCGGGAAGGTTCGGTATGATACACTGCGATTGCCGCACAAGGTTATGGCTCAGGAGGCTGATGGGTCTGTGAAATTTGGGCATGGTGAAGAAGTTTCTGCTTATCTGTTCGATCCTGATATATACACAGATGGTAGAATTTCGGTGCAGGGTATTGATGGGGTTCTCTTCCCACCGGAGGAGGAGTCCAAGACTGAGCCTAAAACTGTTCCGAAAACTGCTTTAGGCGACTCAGAACTGCGGAATCAAGAGGCTTATCAGGAGCTTCTCCATCAACCTGAATCCAAGGATGACCTGCATGCCACCAATAACACCTTTCTGATCAGCATCAAGTGCTAG 1398 0.5157 MDSFLYALSFLLFLSLLPFHTALPQKFPSSSSSSSSGQINSNSILVALLDSHYTELAELVEKALLLQKLEDTVGLHNITIFAPRNEALERQLDPEFKRFLLEPRNLNSLQTLLMYHIVPKRIGSTDWPTANSGPLPHRTLSDHHVHLTTNGPAKKTVGLAEIVRPDDVVRPDGVIHGIERLMIPRSVQEDFNRRRNLRDISAVIPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPHHHFNGMRQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVMAQEADGSVKFGHGEEVSAYLFDPDIYTDGRISVQGIDGVLFPPEEESKTEPKTVPKTALGDSELRNQEAYQELLHQPESKDDLHATNNTFLISIKC 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1162 465 ProSiteProfiles FAS1/BIgH3 domain profile. 40 182 IPR000782 -
Sto8g1162 465 Gene3D FAS1 domain 284 412 IPR036378 -
Sto8g1162 465 MobiDBLite consensus disorder prediction 411 431 - -
Sto8g1162 465 SUPERFAMILY FAS1 domain 244 413 IPR036378 -
Sto8g1162 465 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 9 425 IPR044654 -
Sto8g1162 465 SMART fasc_3 306 412 IPR000782 -
Sto8g1162 465 SMART fasc_3 79 185 IPR000782 -
Sto8g1162 465 ProSiteProfiles FAS1/BIgH3 domain profile. 265 409 IPR000782 -
Sto8g1162 465 Pfam Fasciclin domain 52 184 IPR000782 -
Sto8g1162 465 Pfam Fasciclin domain 290 410 IPR000782 -
Sto8g1162 465 SUPERFAMILY FAS1 domain 43 185 IPR036378 -
Sto8g1162 465 Gene3D FAS1 domain 44 184 IPR036378 -
Sto8g1162 465 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 9 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1162 Sto-Chr8 7362013 7367188 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1162 - - jre:109013503 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1162 8 7362013 7367188 Sto8g1162 8 7362013 7367188 ECH