Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1155 ATGACCCGTTTCTCAGAGAAGATCCGCCTCTCGTCTCTGGTCGTCAAACCGACCCGCTTTCTCTCTCAGAAGCTCACtatcctctctctctcctccttccaTTTCTGCAAGTCCCTTGCTCGCTTCCTGCTCTCCAAAACCCTCTCCTTCCTCACCATGGACAATTTCCTCGCCGATCACGACGATTACTTTTGGGACCTTGATTCCCGTCCCCACCGTCGCTTTCTTCCAGAGCAAGAGCCTCACTTGGAGAATGAGCCCCTTTACTTGGTTCTTTACAGGTGGTGGAAAGAAGTAGAAGGGGATGCTGATCGAGTAGAAAGTGTCCTTTACACAGTAGCAACGAACTCTGATTCTGACTCAGAAGTTGTCCTTCGTTTAAGGAAGGAAGACAATCACGAGGAAATTATAAACACTGAGGCGGGGTCTTCATGTCGTCAATATGCATTGGTTCCTGAAGGGCTGTGGTTGCGTGCTCTTAGACGGTGTCGTGATCCTAATAATGAAGTAAAGGATTTTGGGAGCCTCGTCCATGCAGAAGATTGTTTGCTGGATTTGTTCCCTTTGCAAGTTAGGATATTTGTTTCATGGGAAACAAATTCACTGGTGGCAAAGATAAGCCGGAAGGAAAATGTGGTTGAATTTTACAAGAAAGCTTGCGATATTTTCAGCTCTGACTATAACTCAGTGCACATTTTGGACTTCTCAGGGCAGACATCACAGTTTTTCATAAATGAAAATGAGTCTTCTGGACAACAAGGAGGAGGGGTGAGTATCTTGCAGGTTCTTCTGGAGCTGCAAGTTCATGGACTTTCTGATTCTATAAAGGGTAATGGAAGCAATGAGATATTTGCCGATAGGTCTCCGATGGGATGTTCCTCTCATGGTGGCTCTGTTATGATGAATGGAACCACTCACAATGTGAATTCCTATGTGACAATTACCAATTCCTTTCGAAAGAGTAGCTATAGAGCAGTTGGCCCATTGGGCTTGGCAGGATTACAGAATCTTGGAAATACTTGTTTTATGAATAGTGCTATTCAGTGTTTGGTCCACACCCCAAAGCTTGTTGACTTTTTCTTGGGAGATTACCGGaaagaaataaattatgaaaatccTTTGGGAATGAATGGAGAACTTGCTTTAGCTTTTGGAGATTTACTTAGAAAGCTATGGGTTCCTGGAGCAAGGACTGTGGCACCAAGAACATTCAAGACGAAACTGGCTAATTTTGCTCCTCAGTTCAGCGGTTATAACCAGCATGATTCTCAAGAACTTCTTGCTTTTTTGTTGGATGGACTCCATGAAGACCTTAATCGTGTGAAGCGCAAGCCATACCATGAAGTTAAAGATGCAGATGGTCGTCCAGATGAAGAAGTGGCAGAAGAATATTGGCATAATCACCTTGCTCGCAATGACTCCATAATAGTTGATTTGTGCCAAGGTCAGTTCCGCTCAACATTGGTTTGCCCTACTTGCAAGAAGGTTTCTATCACTTTTGACCCTTTTATGTACCTATCTTTGCCGTTACCTTCTACAATTATGCGGACAATTACTTTGACTGTCCTGAACACTGATGGGCTAACACTGCCTTCCACATTCACCATAACGTTACCCAAGAATGGAATATTGATGGATCTTATTGGGGCCTTAGGCACAGCATGTTCCTTAAGAGATGACGAAACTATCTTGGTGGCTGAGATATACAAGAATCGCATCTGTCGTCTTTTGGAGGAGCCATCTGATTCATTAGCCTTGATTAGAGATGAGGACAAACTTGTTGCTTATCGATTACCAAAAGATAATGAGGCTGGCCACTTGGTTGTTTTCATGCACCAGCAGGTTACAAATTTTGGGAAGGAGAAGTATGTAGAAAGTTTGTTTGGCATTCCTATTGTGGCCAGGTTGCATAGTGTCTCTTGTGGATATGATATTCGTACAGCATATCTGAAGTTAATCAATCCATTTTTGATGAGCACTGAAGATATATTAGATGAgtatgataatgatgatgatgtggataTTAAAGTTAGTGAAGATAATGAATTGGGTGATGCAAGTAGCTCTCCGGGTTTGGAAAGTGATTCAGATTCAGATTTGGAGACTGACTTCAAATTCTACTTACCTGCAATAATTGGAAGGGAGAATGTGAAGTTAAAAATGAACAAACCAATACCATCTACAGTGCTACCCAAAAAGCTGGAGGTGACTGTCTTATGGTCAAATAAGATGATTAAAAAGTATGATACATGCCTGCTCAGCTCATTGCCTGAGGTTTGCAAACCGCAGTTATTCATCAAGAGAACACAAGAATCAGTTTCTATTTACAAGTGCCTCGAAGCCTTCTTAAAAGAGGAGCCTCTTGGGCCAGAAGACATGTGGTATTGTCCTGGGTGCAAAAACCCTCAGCAAGCAACTAAAAAACTAGATCTTTGGAGACTGCCTGAAATTCTTGTTGTTCATTTGAAGAGGTTTTCATTCAGCCGATACTTCAAGAACAAGCTGGAAACATTTGTTGATTTCCCAATCGATGATTTGGATCTCTCAACATATATTGCCCACAAAAATAGCCCCTTTTCCAACCATTACGAGTTGTATGCAATCAGTTGTCATTATGGAGGCTTGGGAGGAGGTCACTACACAGCATTTGTTCGTTATGGTAATGATAAGTGGTACGAGTTCGATGATAGTAGGGTTGTCCCTGCCAGTGAGGACATGATAAAGACTTCTGCTGCATATGTTCTTTTCTACAGGCGAGTTTAG 2763 0.414 MTRFSEKIRLSSLVVKPTRFLSQKLTILSLSSFHFCKSLARFLLSKTLSFLTMDNFLADHDDYFWDLDSRPHRRFLPEQEPHLENEPLYLVLYRWWKEVEGDADRVESVLYTVATNSDSDSEVVLRLRKEDNHEEIINTEAGSSCRQYALVPEGLWLRALRRCRDPNNEVKDFGSLVHAEDCLLDLFPLQVRIFVSWETNSLVAKISRKENVVEFYKKACDIFSSDYNSVHILDFSGQTSQFFINENESSGQQGGGVSILQVLLELQVHGLSDSIKGNGSNEIFADRSPMGCSSHGGSVMMNGTTHNVNSYVTITNSFRKSSYRAVGPLGLAGLQNLGNTCFMNSAIQCLVHTPKLVDFFLGDYRKEINYENPLGMNGELALAFGDLLRKLWVPGARTVAPRTFKTKLANFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDADGRPDEEVAEEYWHNHLARNDSIIVDLCQGQFRSTLVCPTCKKVSITFDPFMYLSLPLPSTIMRTITLTVLNTDGLTLPSTFTITLPKNGILMDLIGALGTACSLRDDETILVAEIYKNRICRLLEEPSDSLALIRDEDKLVAYRLPKDNEAGHLVVFMHQQVTNFGKEKYVESLFGIPIVARLHSVSCGYDIRTAYLKLINPFLMSTEDILDEYDNDDDVDIKVSEDNELGDASSSPGLESDSDSDLETDFKFYLPAIIGRENVKLKMNKPIPSTVLPKKLEVTVLWSNKMIKKYDTCLLSSLPEVCKPQLFIKRTQESVSIYKCLEAFLKEEPLGPEDMWYCPGCKNPQQATKKLDLWRLPEILVVHLKRFSFSRYFKNKLETFVDFPIDDLDLSTYIAHKNSPFSNHYELYAISCHYGGLGGGHYTAFVRYGNDKWYEFDDSRVVPASEDMIKTSAAYVLFYRRV 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1155 920 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 333 348 IPR018200 GO:0004843|GO:0006511
Sto8g1155 920 SUPERFAMILY Cysteine proteinases 330 920 IPR038765 -
Sto8g1155 920 MobiDBLite consensus disorder prediction 680 699 - -
Sto8g1155 920 Pfam Ubiquitin carboxyl-terminal hydrolase 333 917 IPR001394 GO:0004843|GO:0016579
Sto8g1155 920 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 60 920 - -
Sto8g1155 920 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 60 920 - -
Sto8g1155 920 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 863 880 IPR018200 GO:0004843|GO:0006511
Sto8g1155 920 Gene3D Cysteine proteinases 318 530 - -
Sto8g1155 920 CDD Peptidase_C19R 748 918 - -
Sto8g1155 920 Gene3D Cysteine proteinases 613 920 - -
Sto8g1155 920 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 332 920 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1155 Sto-Chr8 7333297 7340285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1155 764 920 Miscellaneous Gene Families AT4G31670 31.875 1.68e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1155 - K21343 cam:101507058 1263.83