Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1117 ATGGCTTCTCCCCACATTTTATCCCTCCTCTCTCTCATCGCCTTCACTTCATCCTTCTCCCTTGCATTCTCAACCCACTCCTTCACTCTCTCTATCTCACCCTTATCCCCCAATCATCCCTCTTCAGATCCCTTTCAAACCCTCAAACTCATTGCCTCTGCTTCTTTAACCAGAGCCCACCACCTGAAGCACCGCAAATCCAATTCCACTCCTTCCCTTGTCAAAACACCCCTATACCCCAAAAGCTATGGAGGATACTCTGTTGATCTCAATTTCGGAACACCCCCTCAGACCTTCCCTTTCGTTATGGACACCGGAAGCAGCCTCGTCTGGTTCCCCTGCTCCTCCCGTTACCTCTGTTCTAAATGTTCCTTCCCCAATATCGACACCGCTACTATCCCCAAATTCATCCCTAAGAACTCTTCCTCCGCCAAGTTCATAGGTTGTAGAAATCCCAAATGTGGATGGATTTTCGGCCCTGATTCTCAATCTCGATGCCAAGATTGCAAACCCGGAGCCCAGAATTGCTCCCAGATTTGCCCTGCTTATGTAATTCAGTACGGTTTGGGCTCAACCGCTGGCTTCTTACTCTCAGAAACTCTCGATCTTCCTGGAAAAACCGTACCCGATTTTCTCGTCGGATGCTCCATCATGTCGATCCGGCAACCCGCCGGAATCGCCGGGTTCGGTCGCGGAGCTGAATCTTTGCCGTCGCAGATGGGTCTCAAGAGATTCTCTTACTGTTTGATGTCTCACCGGTTTGACGACTCCTCCGAGAGCAGTGACCTCATTTTGCAGACTAGCTCCTCTGGCGACACCAAAAGCGATGGCCTTCTCTACACTCCTTTTCAGATAAACCCAGTTACGAACAATTCAGCATTCCGCGAGTACTATTACTTATCTATTCGAAAAATCTTGGTGGGTGAAAAGCGCGTGAAGATTCCATCTAAGTTTCTGGGGCTAGATTCAGAAGGTAACGGGGGTTCCATAGTGGACTCCGGTTCCACCTTCACATTCATGGAGAGGCCAATTTTCGATTTAGTGGCACAAGAATTCGAGAAGCAGATGGCCAATTATACCAGAGCCAAGGACGTAGAAGCCCAATCTGGTTTGAGCCCCTGTTTCGATATTTCAGCCCAGAAATCGGTGAAGTTCCCGGAATTCGCCTTCGGATTCAGAGGCGGTGCCAAGATGGTGTTGCCCTTAGAGAACTACGTGTCCTTGGTAGGCCAATCGGAGGTGGCATGCTTGACGATTCTGTCTGACGACGGGGCCGGTCCGGCGGTTCCCAGAGGGCCGGCGATGATTTTGGGAAACTTTCAGCAGCAAAATTTCTACGTGGAGTATGACTTGGAAAATGAGAGGTTTGGATTTCGGCCTCAGAATTGCAAAAAGAGTGGTTAA 1404 0.4964 MASPHILSLLSLIAFTSSFSLAFSTHSFTLSISPLSPNHPSSDPFQTLKLIASASLTRAHHLKHRKSNSTPSLVKTPLYPKSYGGYSVDLNFGTPPQTFPFVMDTGSSLVWFPCSSRYLCSKCSFPNIDTATIPKFIPKNSSSAKFIGCRNPKCGWIFGPDSQSRCQDCKPGAQNCSQICPAYVIQYGLGSTAGFLLSETLDLPGKTVPDFLVGCSIMSIRQPAGIAGFGRGAESLPSQMGLKRFSYCLMSHRFDDSSESSDLILQTSSSGDTKSDGLLYTPFQINPVTNNSAFREYYYLSIRKILVGEKRVKIPSKFLGLDSEGNGGSIVDSGSTFTFMERPIFDLVAQEFEKQMANYTRAKDVEAQSGLSPCFDISAQKSVKFPEFAFGFRGGAKMVLPLENYVSLVGQSEVACLTILSDDGAGPAVPRGPAMILGNFQQQNFYVEYDLENERFGFRPQNCKKSG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1117 467 SUPERFAMILY Acid proteases 78 463 IPR021109 -
Sto8g1117 467 Gene3D Acid Proteases 69 264 IPR021109 -
Sto8g1117 467 PANTHER OS07G0603500 PROTEIN-RELATED 4 463 - -
Sto8g1117 467 Pfam Xylanase inhibitor N-terminal 86 264 IPR032861 -
Sto8g1117 467 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Sto8g1117 467 PRINTS Pepsin (A1) aspartic protease family signature 329 340 IPR001461 GO:0004190|GO:0006508
Sto8g1117 467 PRINTS Pepsin (A1) aspartic protease family signature 435 450 IPR001461 GO:0004190|GO:0006508
Sto8g1117 467 Gene3D Acid Proteases 265 466 IPR021109 -
Sto8g1117 467 ProSiteProfiles Peptidase family A1 domain profile. 86 459 IPR033121 -
Sto8g1117 467 Pfam Xylanase inhibitor C-terminal 298 459 IPR032799 -
Sto8g1117 467 CDD pepsin_A_like_plant 85 463 IPR034161 -
Sto8g1117 467 PANTHER BNACNNG47670D PROTEIN 4 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1117 Sto-Chr8 7066587 7067990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1117 69 465 Miscellaneous Gene Families AT1G44130 25.408 8.84e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1117 - - gmx:100805927 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1117 8 7066587 7067990 Sto8g1117 8 7066587 7067990 ECH