Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1109 ATGACGCTTGGCTCAGGAGGATCGAGTGTCGTGGTACCTAGGAACTTCAGATTGCTGGAGGAGCTTGAACGGGGAGAAAAAGGTATTGGAGATGGCACAGTTAGCTATGGAATGGATGACGGTGATGACATTTACATGCGCTCTTGGACTGGCACCATTATTGGTCCCCATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTCTGTGATAAAGATTACCCGGAGAAGTCCCCAAGTGTTCGGTTTCATTCACGAATCAATATGACTTGTGTTAATCATGAAACAGGAGTGGTTGAACCAAAGAAATTTGGCGTTCTTGCTAATTGGCAACGAGAGTACACAATGGAAGATATACTGACCCAGCTGAAAAAGGAAATGGCAGCTCCTCATAATAGGAAGCTTGTCCAGCCTCCAGAAGGAACCTACTTTTAA 441 0.4376 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKSPSVRFHSRINMTCVNHETGVVEPKKFGVLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1109 146 Gene3D Ubiquitin Conjugating Enzyme 4 146 IPR016135 -
Sto8g1109 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D 10 140 - -
Sto8g1109 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 140 - -
Sto8g1109 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Sto8g1109 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Sto8g1109 146 Pfam Ubiquitin-conjugating enzyme 43 136 IPR000608 -
Sto8g1109 146 SMART ubc_7 16 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1109 Sto-Chr8 7008619 7011409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1109 K10704 - pvy:116143857 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1109 8 7008619 7011409 Sto8g1109 8 7008619 7011409 ECH