Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1101 ATGATGGGAGAGAAATACGTTGGGACACGCCAAGGAGGGATTGGAAGAAGTTTCGAGGAGGACAGCGCTATACTGGACACAGATGAAGATAAACATAACAGAAGAGTGGGAACTGAACTGAGGAAGGTGTATTTCTCCTATTGCTTCAGTTATGCTGGCTTCATACCAATTAGATTTCCTTCTTCAGCCTTAAGCTCAGACCAAAATGGGTTATACAGAACAGAGTTCTTCACCCAAATACTTGATCACTTCAATTACAACCCCCAGAGCTACCAAACCTTTCAGCAACGATATCTCATCAATGATTCTTATTGGGGAGGTGCCTCCAATAAAGCCCCCATCTTTGTGTACACAGGAAATGAAGGGGACATTGAATGGTTCACTCAAAATACTGGCTTCATGTTCGAAACAGCTCCCTATTTCAAAGCCCTTCTAGTTTTCATCGAGCATAGATTCTACGGAAAATCAATTCCATTTGGGGGAAATAAAGATTTTGCGTATGGGAATAGCAGTAGAATTGGATATCTGAGCAGCACACAGGCATTGGCTGATTATGCAACTCTCATCCTTGATCTCAAGAACAATCTATCTGCTGCTGACTCCCCTGTTGTGGTATTTGGAGGATCCTATGGAGGAATGTTGGGTGCTTGGTTCAGGATGAAGTATCCCCACGTTGCCATTGGAGCCTTGGCTTCCTCAGCCCCCATTCTCCAATTTTTGGATTTGGTTTCCCCAGAAACCTTCAACGACATCATCACACGAGATTTCAGGAGCGAGAGTGAGAATTGTTACAAAGTGATCAAAGGTTCCTGGGAACAAATACAAGAGACGAGTGAAATACCCGGAGGGCTAGAAATCCTACGCAAATCCTTCAGAATATGCGAGAATTATATAAGCTCCGGTGCTTTGACTAATTGGCTTCGCACTTCTTTGGTTTATACGGCCATGACGGATTATCCAACAccttctaattttttaaatcccTTGCCAGCTTATCCTGTCAGAAAGATGTGCGAAGCAATTGACAACCCAGCCCATGGAAACGACACATTCTCCAAATTGTATGCAGCAGCTAACATCTTCTACAATTATAGTGGGAGTGCCACGTGTTTTGACCTTAGCGATGGTTCCGATCCTCATGGTCTCGGAGGATGGCAATGGCAGGCTTGCACTGAGATGATAATGCCAGAGGGTGGGAGCAACGAGTTGAGCATATTCCCAGCTTATGAGTGGAAGTACGAAGACAGAGTGTCTTACTGCAAAACTAAATATGACATAGAGCCCAGGCCCCATTGGATTACTACTGAGTTTGGTGGCCACGCCATTGATAGAGTCCTGAAAAGATCAGGAAGCAACATTATCTTCTTCAATGGCTTAAGAGACCCTTGGAGTGGTGGAGGGGTGTTGAACAATATTTCTGAGAGCGTGGTCGCTATTGTTGCCAAACAAGGGGCTCATCATGTAGACCTAAGGTTCTCCACGCACGATGATCCAAAGTGGCTAACAGATGTAAGGAAACAAGAGGTTGATATTATATCCACCTGGATCTCCCAATATTATCAAGACCTCACCCAGTAA 1578 0.4398 MMGEKYVGTRQGGIGRSFEEDSAILDTDEDKHNRRVGTELRKVYFSYCFSYAGFIPIRFPSSALSSDQNGLYRTEFFTQILDHFNYNPQSYQTFQQRYLINDSYWGGASNKAPIFVYTGNEGDIEWFTQNTGFMFETAPYFKALLVFIEHRFYGKSIPFGGNKDFAYGNSSRIGYLSSTQALADYATLILDLKNNLSAADSPVVVFGGSYGGMLGAWFRMKYPHVAIGALASSAPILQFLDLVSPETFNDIITRDFRSESENCYKVIKGSWEQIQETSEIPGGLEILRKSFRICENYISSGALTNWLRTSLVYTAMTDYPTPSNFLNPLPAYPVRKMCEAIDNPAHGNDTFSKLYAAANIFYNYSGSATCFDLSDGSDPHGLGGWQWQACTEMIMPEGGSNELSIFPAYEWKYEDRVSYCKTKYDIEPRPHWITTEFGGHAIDRVLKRSGSNIIFFNGLRDPWSGGGVLNNISESVVAIVAKQGAHHVDLRFSTHDDPKWLTDVRKQEVDIISTWISQYYQDLTQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1101 525 Gene3D alpha/beta hydrolase 76 516 IPR029058 -
Sto8g1101 525 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 47 524 - -
Sto8g1101 525 SUPERFAMILY alpha/beta-Hydrolases 132 490 IPR029058 -
Sto8g1101 525 Gene3D Serine carboxypeptidase S28, SKS domain 244 410 IPR042269 -
Sto8g1101 525 Pfam Serine carboxypeptidase S28 79 506 IPR008758 GO:0006508|GO:0008236
Sto8g1101 525 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 47 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1101 Sto-Chr8 6942535 6947367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1101 K01285 - gmx:100803257 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1101 8 6942535 6947367 Sto8g1101 8 6942535 6947367 ECH