Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1095 ATGGCATGGATGGAAAATACTGCaggaagtgggagagaaaaaGAAGTAGTGGGAGATAATGGTTTCTTGAAAGTGCCACAGCCTTCTATTAGTAGCAGTGGTTCAGGTGGGGATATTGATCCAGTACATAAGAGAGGTGACGGGAAAGATAATCTTTCTTATGCCAACATCCTTCGTTCAAGGAACAAGTTTGTTGATGCACTTGCATTATATGAGCGCGTCCTGGAGAATGATAATGGAAATATAGAAGCTCTCATTGGGAAAGGGATATGCCTGCAGATGCAGAACATGGGGAGGCTTGCTTTTGACAGTTTTGCTGAAGTTATCAAGTTGGATCCTCAAAATGCTTGTGCCCTCACACATTGTGGTATTTTGTACAAAGAAGAAGGTCGTTTGGTGGAGGCGGCTGAGTCATACCAGAAGGCTTTACGAGTGGATGCTTCATACAAAGCAGCTTCTGAATGCCTCGCCATTGTTTTAACAGATATTGGTACCAACATAAAGCTTGCTGGAAACACTCAAGAGGGAATTCAAAAATATTATGAAGCTCTCAAAATAGATCCACACTATGCGCCAGCATATTATAACCTTGGTGTTGTCTATTCTGAAATGATGCAATATGACATGGCCCTTAGTTTCTACGAGAAGGCAGCATCAGAGAGGCCTATGTATGCTGAAGCATATTGCAATATGGGCGTAATTTATAAGAATCGTGGTGATTTGGAAGCAGCTATTGCTTGTTATGAGAGGTGTTTAGCTGTTTCACCAAACTTTGAGATTGCAAAGAATAATATGGCTATAGCCTTGACTGATTTGGGAACAAAGGTTAAATTGGAAGGAGACATCAATCAAGGTGTGGCTTATTACAAAAAAGCTCTGTATTATAATTGGCATTATGCTGATGCTATGTATAATCTTGGGGTCGCATATGGTGAAACGCTGAAGTTTGACATGGCTATTGTATTTTATGAACTTGCTTTCCATTTCAATCCTCATTGTGCGGAAGCTTGTAACAATCTAGGGGTTATATATAAGGATAGAGACAACCTTGATAAAGCTGTAGAGTGTTACCAGCTTGCGCTATCAATTAAACCTAACTTTTCACAATCATTGAATAATCTTGGCGTTGTCTATACTGTCCAGGGTAAAATGGATGCTGCTGCAAGTATGATTGAGAAGGCTATCATTGCAAATCCAACTTATGCAGAAGCCTACAATAACTTAGGAGTTCTTTATAGGGATGCTGGTGATATCACTCTGGCAATCAATGCTTATGAGCAATGTCTTAAGATAGATCCTGACTCTCGAAATGCTGGCCAGAACCGCTTGCTTGCTATGAATTACATAGATGAAGGACATGATGATAAACTTTTTGAAGCTCACAGGGACTGGGGCAAGCGCTTTATGAGATTATATTCACAGTACACATCATGGGACAATTCAAAAGATCCTGAACGACCTCTTGTCATAGGATATGTATCTCCTGATTATTTTACCCATTCCGTGTCATATTTCATAGAAGCTCCCCTTGTCTATCATGACTACACCAATTATAAAGTGATAGTTTATTCAGCAGTTGTCAAGGCAGATGCAAAAACCATTAAATTTAGGGAGAAAGTTTTACAGAAGGGTGGGATCTGGAAAGATATATACGGTATTGATGAAAAGAAGGTTGCTGATATGGTTAGAGAAGATCAGGTTGACATCCTTGTAGAGCTTACTGGTCATACTGCAAACAATAAGTTGGGAATGATGGCATGTCGACCTGCACCAGTTCAGGTGACTTGGATTGGTTATCCTAATACAACTGGCTTACCTACAATTGATTATAGAATAACTGATTCGCTGGCAGACCCTCCTGAAACAAAGCAGAAGCATGTTGAGGAGTTAGTTCGGTTACCGGAATGCTTCCTTTGTTATACACCTTCTCTTGAGGCTGGGCCTGTTTGTCCCACTCCTGCTCTTTCCAATGGCTTCATTACATTTGGAAGCTTTAACAATCTTGCCAAGATTACACCTAAAGTATTGCAAGTTTGGGCAAGGATATTATGTGCAGTTCCAAATTCTCGCCTTGTGGTGAAATGTAAACCATTTTGCTCTGATAGTGTGAGACAGAGATTTCTTGCGACATTGGAGCAGTTAGGTTTGGAGACGCTGAGAGTTGATCTTCTGCCGCTAATTCTTCTTAACCACGATCACATGCAAGCATATTCTCTTATGGACATCAGTTTGGACACCTTTCCTTATGCTGGAACAACTACAACATGTGAATCTTTATACATGGGAGTTCCATGTGTCACTATGGCTGGTTCTGTACATGCACACAATGTTGGTGTTAGCCTTCTTAGCAATGTTGgttTGGGGCGTTTGATTGCCAGAAATGAAGATGAATACGTTCAGTTGGCTCTGCAGTTGGCCTCTGACATTTCAGCACTACAAAATTTGAGGATGAGTCTTCGAGAACTCATGTCCAAGTCCCCTGTGTGTGACGGAGCAAACTTTACCCTTGGTCTAGAATCAACATTTAGGAACATGTGGCGTAGATATTGTAAAGGAGATGTTCCATCCTTAAAGTGCATGGAATTGTTGCAGCAGCCAACCACAATGGACGAGCCATCTAATAAGATTTCCGAGTCAACAAGGATAGTGAACTCAAAGGAGGCCAGTCCTGGATCGGTCAAGACGAATGGATTAAATTCAATGCAACAATCTAAGCTCACTATCCGCAGTTGCGAAGAAAATGGCGGGTCATTGAATCACTCGAGTGCAGTATTAGGTTGCAATGATGTATATTGTAGTGATTGCTACTGGAAGAGGCTAGCAGCAACTACTACATCACAGAGTTAA 2847 0.4074 MAWMENTAGSGREKEVVGDNGFLKVPQPSISSSGSGGDIDPVHKRGDGKDNLSYANILRSRNKFVDALALYERVLENDNGNIEALIGKGICLQMQNMGRLAFDSFAEVIKLDPQNACALTHCGILYKEEGRLVEAAESYQKALRVDASYKAASECLAIVLTDIGTNIKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDMALSFYEKAASERPMYAEAYCNMGVIYKNRGDLEAAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALYYNWHYADAMYNLGVAYGETLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGDITLAINAYEQCLKIDPDSRNAGQNRLLAMNYIDEGHDDKLFEAHRDWGKRFMRLYSQYTSWDNSKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYTNYKVIVYSAVVKADAKTIKFREKVLQKGGIWKDIYGIDEKKVADMVREDQVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELVRLPECFLCYTPSLEAGPVCPTPALSNGFITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCSDSVRQRFLATLEQLGLETLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLSNVGLGRLIARNEDEYVQLALQLASDISALQNLRMSLRELMSKSPVCDGANFTLGLESTFRNMWRRYCKGDVPSLKCMELLQQPTTMDEPSNKISESTRIVNSKEASPGSVKTNGLNSMQQSKLTIRSCEENGGSLNHSSAVLGCNDVYCSDCYWKRLAATTTSQS 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1095 948 ProSiteProfiles TPR repeat region circular profile. 334 366 - -
Sto8g1095 948 Pfam Glycosyl transferase family 41 479 638 IPR029489 -
Sto8g1095 948 Pfam Glycosyl transferase family 41 655 835 IPR029489 -
Sto8g1095 948 ProSiteProfiles TPR repeat region circular profile. 191 222 - -
Sto8g1095 948 MobiDBLite consensus disorder prediction 25 47 - -
Sto8g1095 948 PANTHER UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED 38 861 - -
Sto8g1095 948 SUPERFAMILY TPR-like 352 801 IPR011990 GO:0005515
Sto8g1095 948 ProSiteProfiles TPR repeat profile. 368 401 IPR019734 GO:0005515
Sto8g1095 948 ProSiteProfiles TPR repeat profile. 157 190 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 157 190 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 82 115 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 334 367 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 225 258 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 402 435 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 300 333 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 266 299 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 191 224 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 368 401 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 48 81 IPR019734 GO:0005515
Sto8g1095 948 SMART tpr_5 116 149 IPR019734 GO:0005515
Sto8g1095 948 ProSiteProfiles TPR repeat profile. 191 224 IPR019734 GO:0005515
Sto8g1095 948 Pfam Tetratricopeptide repeat 225 258 IPR001440 GO:0005515
Sto8g1095 948 Pfam Tetratricopeptide repeat 334 367 IPR001440 GO:0005515
Sto8g1095 948 Pfam Tetratricopeptide repeat 191 222 IPR001440 GO:0005515
Sto8g1095 948 Gene3D Tetratricopeptide repeat domain 161 228 IPR011990 GO:0005515
Sto8g1095 948 SUPERFAMILY TPR-like 265 437 IPR011990 GO:0005515
Sto8g1095 948 Pfam Tetratricopeptide repeat 369 433 - -
Sto8g1095 948 ProSiteProfiles TPR repeat profile. 402 435 IPR019734 GO:0005515
Sto8g1095 948 SMART sel1 334 365 IPR006597 -
Sto8g1095 948 SMART sel1 300 331 IPR006597 -
Sto8g1095 948 SMART sel1 225 256 IPR006597 -
Sto8g1095 948 SMART sel1 191 222 IPR006597 -
Sto8g1095 948 SMART sel1 402 433 IPR006597 -
Sto8g1095 948 ProSiteProfiles TPR repeat profile. 334 367 IPR019734 GO:0005515
Sto8g1095 948 Gene3D Tetratricopeptide repeat domain 270 473 IPR011990 GO:0005515
Sto8g1095 948 Gene3D - 474 643 - -
Sto8g1095 948 ProSiteProfiles TPR repeat region circular profile. 402 434 - -
Sto8g1095 948 ProSiteProfiles TPR repeat region circular profile. 225 257 - -
Sto8g1095 948 Gene3D Tetratricopeptide repeat domain 46 160 IPR011990 GO:0005515
Sto8g1095 948 MobiDBLite consensus disorder prediction 868 898 - -
Sto8g1095 948 Gene3D Tetratricopeptide repeat domain 229 269 IPR011990 GO:0005515
Sto8g1095 948 SUPERFAMILY TPR-like 50 274 IPR011990 GO:0005515
Sto8g1095 948 ProSiteProfiles TPR repeat profile. 116 149 IPR019734 GO:0005515
Sto8g1095 948 Gene3D Glycogen Phosphorylase B; 644 828 - -
Sto8g1095 948 ProSiteProfiles TPR repeat profile. 225 258 IPR019734 GO:0005515
Sto8g1095 948 ProSiteProfiles TPR repeat profile. 300 333 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1095 Sto-Chr8 6877594 6888550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1095 210 897 Glycosyltransferase AT3G11540 65.262 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1095 K09667 - gmx:100776844 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1095 8 6877594 6888550 Sto8g1095 8 6877594 6888550 ECH